| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2982 |
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| Symbol | |
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| ID | 5610537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 3610920 |
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| End bp | 3612011 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933922 |
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| Product | nitroreductase-like protein |
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| Protein accession | YP_001474717 |
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| Protein GI | 157376117 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0778] Nitroreductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA TTGCCCGCCA GCTTCTTCCT GCCAATTTAA AGAACTCCAT CAGAGATACT
TTAACGCGAT TCGATTCGTT GTTATTGAGC ATTTTTTCTA AACCTATTTT CATGGCGCAT
CCTCGTATAT CTAATGCTAT ATATCGCTTA TTTAGTTCGA AATTCGACCG TGAACAGCAG
GCTGTTTTGG CTGGCCGGCT AGCCTATAGA GTCAATACCG GCGTAGGCGA AAAGAGTAGC
GCACTGCTTA GGCGTAACAC CCATAGGCTC GAAAAAGGCC TGAGCATGCA GCCTCGTCGT
GAGGTCTTTG CCGAAGAGTT TATTATCGAA ACTGCAACAT GTTTCGTTCA GTGCATGGCG
GCCGATAAAA TTTGTGAACA GGAGTTAAAG TGGGCTGAAG ATGTGCTCAG CAGCTATTTT
GGTGCAGTGA CCCATACGGC AAACATCGCC GAGGCTTATC GCATCTTTGC TCAGACGAGC
AGATGCAGTG ATACGTCTGA ATCAGGTAGT GCTCCATCGA GTATTCCTTA TCAGCATCAG
CAGATAGAAA AATCTCACAT CGATACCGAT TCCTTTACCG CCCTGTGCCG GCAGCGCCGT
GCCGTTCGTT GGTTTAGCGA GCAGTCGGTA GTCGATGCCG ATATCGACAG GGCGATCGAG
ATCGCATCAC TTGCCCCCAG TGCCTGTAAC CGCCAGCCGT TTGAGTTTTT TGTAGCTAAC
GATAGGGAGT TAGCTCCATC CATAGCTAAG TATGCGGGTG GTACATCAGG TTTTGTTGAT
AATATTCCTT GCACCATTGT GGTTGTTGGT GATTTGAGTG CCTACCCAGC CGAGCGGGAC
AGACATGTCA TCTATATTGA TGGCTCATTA GCCGCTATGC AGTTGATGCT GGCTTTGGAG
ACGATGGGCT TGAGTAGTTG CCCGATTAAT TGGCCCGATC TCGATGTGCC CGAACAGAAG
ATGGCAAAGC GCCTGGGGTT AAAACCTTTT GAGCGTCCAA TTATGCTTAT TGCCGTAGGC
TATGCCGAGT CTGATGGCAT GATCCCTTTT TCACAGAAAA AACGCGCTGG CGTGTTACGA
AAAGACATTT AA
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| Protein sequence | MKTIARQLLP ANLKNSIRDT LTRFDSLLLS IFSKPIFMAH PRISNAIYRL FSSKFDREQQ
AVLAGRLAYR VNTGVGEKSS ALLRRNTHRL EKGLSMQPRR EVFAEEFIIE TATCFVQCMA
ADKICEQELK WAEDVLSSYF GAVTHTANIA EAYRIFAQTS RCSDTSESGS APSSIPYQHQ
QIEKSHIDTD SFTALCRQRR AVRWFSEQSV VDADIDRAIE IASLAPSACN RQPFEFFVAN
DRELAPSIAK YAGGTSGFVD NIPCTIVVVG DLSAYPAERD RHVIYIDGSL AAMQLMLALE
TMGLSSCPIN WPDLDVPEQK MAKRLGLKPF ERPIMLIAVG YAESDGMIPF SQKKRAGVLR
KDI
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