| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2106 |
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| Symbol | |
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| ID | 5614236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2548518 |
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| End bp | 2549393 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640933003 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473843 |
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| Protein GI | 157375243 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.89932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG ATATGATATT CGGTGTCGAG TTTCCACGGT CAAAAATTGA TTTTGACTTC
GCCATGCATA CGATGCAGGA TTTTTATAGT AACTATGAGA GAGGCTTGTT TACCGATCCC
CACCGCCTGT TCTTTAACGC CATTATTTAT ATTACACATG GATGCGGCAA GCATTATGTT
GATCATCAGG TGTGCCATAT AAAGCCGGGA ACAATACTGT TTATATCTAA ATATCAGGCG
CATAGATTTG AATATAATCC AGGGATCCGC GGCTACATCA TACCTTTTTG CGACAATATT
TTGTTTTACG GTAATGATGA CCCTTATAAA AGCAGGATCC GTTCGGCTTT TGAAGACATC
AATTTTTTGC ATGAAAAAGA ACAAACCTGC AGCTTCTTCT TTGACCAGTT ATGGTTGGAG
TACAAAAACC TACACAGCAA TCTAAGCGAA GAGGTGATCC GTAACTCCTT GCGAACGTTA
ATATTAAAAA CATTGGTTCG ACAGCATCAA TCATCCTTTG AATCAAATAG CCACGCTCAC
TATTCATCAG ATTATTGTAA GTTTCATGAT CTGATTAAGA CACACTATGT GTATACCCGT
ACTGTAGAAA AATATGCAAA TATGATGGGT GTTACGACAA AGAAATTGAA CCAAATTGCC
AAGGAAAATA CCGGGAAAAC AGGAAAGGAG TTGATCGATT CATATGCGGT TTTAGAATCT
AAAAGGCTAT TGGCATACAG TCAGGACCCG ATTGCGTCTA TTGCCCAGAA GTTAGGATTC
AGTGAACCAA CCAACCTGAC AAAATTCTTT AAAAAGCACT GTGGTTTAAC GCCTAAAGAG
TTTCGCAACC TATGTTTATT CCATAATTCC AAATAG
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| Protein sequence | MSEDMIFGVE FPRSKIDFDF AMHTMQDFYS NYERGLFTDP HRLFFNAIIY ITHGCGKHYV
DHQVCHIKPG TILFISKYQA HRFEYNPGIR GYIIPFCDNI LFYGNDDPYK SRIRSAFEDI
NFLHEKEQTC SFFFDQLWLE YKNLHSNLSE EVIRNSLRTL ILKTLVRQHQ SSFESNSHAH
YSSDYCKFHD LIKTHYVYTR TVEKYANMMG VTTKKLNQIA KENTGKTGKE LIDSYAVLES
KRLLAYSQDP IASIAQKLGF SEPTNLTKFF KKHCGLTPKE FRNLCLFHNS K
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