| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1754 |
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| Symbol | |
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| ID | 5610767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2107524 |
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| End bp | 2108057 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932624 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473493 |
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| Protein GI | 157374893 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.213928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCA TAATTTTTTC AGAATTTATC TCGCTCGTTG AAGACAAATT TGGCCTTGAG
ACATGCCAAA GCATGCTGGA TGCCAACGAA GATCCCGGTA TCTACACCAC TGTGGGAACT
TACGATCATC GAGACCTGAT AAAATTAATC AACAGCCTAA GTAAGTTAAC CGGTATCTCC
TGCGCCGATC TGCAACAGGT ATACGGTGAG TCCGTATTCA ACCAGCTGTT TAAAAGCATG
CCTGAACTCG AGGGAAAATA TGACAGTACC TTTAGCTTTA TTAAAAGTGT CGAAGCATCG
ATTCACATTG AGGTGAAAAA ACTCTACCCT CAGGCTAAAC CACCCAGATT CAATTTCATC
TCACAATCCG CCTCCGAGCT GGTGATGGAC TATCATTCTG CACGGTGTTT GTCTCATGTC
TGCTTCGGTC TGATTAATGG GTGTGCCAAC CATTTCAACC AGACAGTCAC TATCGACATG
GCACCACTAT CCCAAGATAA CTCGGAAGTG CGTTTCACTA TCACCTATGT TTAA
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| Protein sequence | MKGIIFSEFI SLVEDKFGLE TCQSMLDANE DPGIYTTVGT YDHRDLIKLI NSLSKLTGIS
CADLQQVYGE SVFNQLFKSM PELEGKYDST FSFIKSVEAS IHIEVKKLYP QAKPPRFNFI
SQSASELVMD YHSARCLSHV CFGLINGCAN HFNQTVTIDM APLSQDNSEV RFTITYV
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