| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1736 |
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| Symbol | |
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| ID | 5609983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2084070 |
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| End bp | 2086514 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932606 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001473475 |
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| Protein GI | 157374875 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00195971 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000014199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGATTAAGC TCGATAACCA CAATGCTCAG TTAAGTGCGG ATGAGGCCTT AAAGGGCGCC
TTGAGCTTAG AGTTTGATAA TCAAACTCCC TTAGTCGACA CTCTGGCCTC CTCATCGACT
GATTTAACGG TTCGGCTCAA TGAACTCGAA GGCGAAGGGG ATCGGCTTTC CACATTCTTA
AACCTGCACA AAGAGCAGGT CTCGGCTTAT CGGTTAGAGC ATGAGGTTTC ACGCTCAAAG
CTGACTCATC TTGAGGTAAT GGTTGAGCAG AAAAAGCAGC AGATAGAAGA TAATCGAAAA
CAGAGCGACG AAGTTGCGGC CGAGCAATCC AGTGAGAGTC ATCAGCAGCA GGCATCAGAA
CTCGAGCAGT TAATGACCGA GGCGGATCTT CAGCAGGAGA TCAATGAAGA GTCAGAATCG
AGACTCACTA TCGCGACCCA AGAACAAGCC AAACTCAGAG CCAAACAGGA AGCTTTGAGT
CAGTCTCTTG CCGAAGAGAG AGGGCGTTTA GCCCTGGTCT CTAAGTTACT GCCGGATGAG
ACCGAACTCG AGGGCGAAAA AGCCCTGTGG CAGCTACTCG AAGTGAAACC CGGTTGGGAG
AAAGCCGTCG AACTTCTGTT TGATGGATTG CTTAAGACTC CTGCCGACGT CGAAGCACAA
GAGGGTCGTG AAGGATTTAG CTCATGGGAT CAGCACACCT GGTCCGTTGT CAGCTGCAGT
GCCAACCTCT CACCTTGGCT ATCTAATGTT CAGTGGGCGG AAAGTATCGA TGCTGCTAAG
CCACTACTCG TCGGTTTAGG TGACAATGAA CGTATCGCCA CCGCCGACGG TTATCTGCTT
GGCAAAGGTT TCGTGATTAG AAAGGGCACG GATTCGGGCT CTCTGGTGCA GTTAAAGCGG
GAACAGGATG CGCTTGAATT AAGCATTACC GGTTCCGAGG CCCTGTTAAG CGATCTGTTA
TCACAGAATC ATGAGCTGCA CGCCATTATC GAACCTTTGA AATTATCGCT CCAGTCGGGT
AACGAACGTC TGCAGCAGTT GAGACTCTCT ATTGCGGGGT TAAGTTCACA GATAAGCGCC
GCGGAGCACA GGGCAAAGGA GTGTGAGGCG AGAGGTAAGC GACTGAACCT GGAGTTTGAG
CAGTATAAGT TAACGCTCGA TGAGCTTTTG GTCACCCAAG CGGCGCTCAG CGACAAGCTC
GGCGGCGGAC TCGGCAAATT ACAGGCAGCA GAAACCGAAC AAGTCCGATT CGTACAGCAA
CTTCAGCTGA AAGGCGAACA GATAAAAGCG CTAAAAGAGC AGGGCGCTTC GCAGCAGTCG
AAACTCAATG AGTCCAACTC TGTGATGCAG GCACTGAAGA CAAAAATTGC CCTCAATGCC
CAGTCCATCA CACAGCAACA GACCCGTATC GAAGAGTTGA GCCTGGCTAA GTCGGCACTG
GAAAACCAGT TGGCGAAGCA AGATGCTGAC AACGAAGATG GCAAGCTTAG TGCGTTAAAT
GAACAGCTTG CGAAAGCCCT GGCTAAGCAG GAACAGAAGC AGACCGAGCT GTCGACACTG
CGTCAAGAGC AAACCCGGCT GCAAGAAGCG AGTGATAGCG CAGGATTAAC GAAAAAACAA
CACCTTGGCA AGATAGAACA CTTGACTCAG TCTATCAGCA CGTTAAAGTT ACGTCGCGAA
GGTTTAAAAG GTCAGGCAGA CAGCCAATTG ATGCAGCTTA ATGAGCAAGA GATTAAGCTC
GATGAAGTTA AGCTCTCTTT AGATATGAAT AAGAGTTCGC AGGCCCGCCA AAGAGAGTTA
GAGCGAGTAC GTGCCCGCAT TACTCATCTG GGGGCGATCA ACTTAGCCGC CATCGAGGAA
TATGAGCAGC AAAGTGAGCG AAAATCATAT TTAGATAGTC AGGATGAGGA TCTAACATCG
GCACTGACCA GCCTCGAAGA GGCGATTCGT AAGATAGATA GAGAGACGAA GAGTCGTTTT
AAAGAGACCT TTGATAAAGT GAACCAAGAT TTAGGTGTAC TCTTTCCGAA AGTATTTGGC
GGAGGCAGTG CACATCTGGC TTTGACCCAT GATGACTTGC TCGAAACCGG AGTGACGATT
ATGGCGAGGC CACCGGGTAA AAAGAATAGT ACGATTCATC TTCTTTCCGG TGGAGAAAAA
GCGTTAACCG CTTTATCATT GGTGTTTGCG ATTTTCAGAC TGAATCCTGC ACCTTTTTGT
ATGTTGGATG AGGTCGATGC ACCTTTAGAT GATGCCAACG TCGACAGATT CTGCCGGCTG
GTCAAAGAGA TGTCTCAAAG TGTGCAATTT ATATATATCA GTCATAACAA GATCACCATG
GAATTGGCTG ACCAACTGAT AGGCGTCACT ATGCATGAAC CGGGTGTTTC ACGCATAGTC
GCTGTAGATA TTGATGAAGC GGTGGCACTA GCCGACGCTG TTTAA
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| Protein sequence | MIKLDNHNAQ LSADEALKGA LSLEFDNQTP LVDTLASSST DLTVRLNELE GEGDRLSTFL
NLHKEQVSAY RLEHEVSRSK LTHLEVMVEQ KKQQIEDNRK QSDEVAAEQS SESHQQQASE
LEQLMTEADL QQEINEESES RLTIATQEQA KLRAKQEALS QSLAEERGRL ALVSKLLPDE
TELEGEKALW QLLEVKPGWE KAVELLFDGL LKTPADVEAQ EGREGFSSWD QHTWSVVSCS
ANLSPWLSNV QWAESIDAAK PLLVGLGDNE RIATADGYLL GKGFVIRKGT DSGSLVQLKR
EQDALELSIT GSEALLSDLL SQNHELHAII EPLKLSLQSG NERLQQLRLS IAGLSSQISA
AEHRAKECEA RGKRLNLEFE QYKLTLDELL VTQAALSDKL GGGLGKLQAA ETEQVRFVQQ
LQLKGEQIKA LKEQGASQQS KLNESNSVMQ ALKTKIALNA QSITQQQTRI EELSLAKSAL
ENQLAKQDAD NEDGKLSALN EQLAKALAKQ EQKQTELSTL RQEQTRLQEA SDSAGLTKKQ
HLGKIEHLTQ SISTLKLRRE GLKGQADSQL MQLNEQEIKL DEVKLSLDMN KSSQARQREL
ERVRARITHL GAINLAAIEE YEQQSERKSY LDSQDEDLTS ALTSLEEAIR KIDRETKSRF
KETFDKVNQD LGVLFPKVFG GGSAHLALTH DDLLETGVTI MARPPGKKNS TIHLLSGGEK
ALTALSLVFA IFRLNPAPFC MLDEVDAPLD DANVDRFCRL VKEMSQSVQF IYISHNKITM
ELADQLIGVT MHEPGVSRIV AVDIDEAVAL ADAV
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