| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1257 |
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| Symbol | |
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| ID | 5613898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1491913 |
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| End bp | 1492125 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640932110 |
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| Product | putative cold shock-like protein |
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| Protein accession | YP_001472996 |
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| Protein GI | 157374396 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.143325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAATT CAACTACTGG TACAGTAAAA TGGTTTAACG AAGAGAAAGG TTTCGGATTT
ATTTCTCAAG AAAATGGCGG TGATGATGTA TTCGTTCATT TCCGTGCTAT CGCTTCAGAT
GGTTTCAAGA CTCTTGCAGA AGGTCAGAAA GTATCTTTTG AAGTTGAGCA AGGCCAAAAA
GGTCTTCAAG CTGCGAACGT AGTAGCTATC TAA
|
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| Protein sequence | MSNSTTGTVK WFNEEKGFGF ISQENGGDDV FVHFRAIASD GFKTLAEGQK VSFEVEQGQK
GLQAANVVAI
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