| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1027 |
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| Symbol | |
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| ID | 5610202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1223070 |
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| End bp | 1224383 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931875 |
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| Product | phosphoesterase, PA-phosphatase related |
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| Protein accession | YP_001472766 |
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| Protein GI | 157374166 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.313073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.124762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AGATAAAACA GATAGCCGCA GCTATATCGA TAGGTTTACT GAGCACATCC
GCTCTTGCCC AGAGTGAGAT CTTTGCCGGA CAGTCCGGCA CAATATCTGA CATTGGTGAT
GTGGTTCAGA TCCTTCTTCC TGCTGGGGGG CTGGCAGGAA GTCTCTGGAT TGGTGACACC
GAAGGTGCCT GGCAACTCAC AAAGGGGGTC GCGACCACCT CGGCCATCAC GCACGGCTTA
AAATTTAGCT ATGAACGACT CAGACCCGAT GGCAGTGAGC ACAACTCCTT TCCTTCGGGG
CATACCTCGG CGGCATTTTC GGGTGCCGCT TATATTCATC ACAGATACGG CAATGCCTGG
GGGATCCCTG CATATGGTGC GGCTGCCTTT GTGGGGGCCA GCCGTGTATG GGCTAACCGT
CACTATCTGG ATGATGTCAT GGCCGGTGGT TCTATTGCTG TGCTCAGTAG CCTATATTGG
ACCGAGCCTT ACAACCAATC CGACTTCGTG ATATCTCCTA CCATAGGTGA GGGGAGCGTA
GGACTCTCGG TTAATTACAC ACCGGGCAGA GCGGGGGCGA AATCTGACCT CAGCTCAAAG
CATAAGAGTG ATTGGGGTAA GGTCAATAAG AGCTACCGCA ACAGTTATGA GCTATTTATC
GGCGGCGCCG ATACCAATGA GAACAGCATT CAGGACGCAG GTGGTCAAGC TTTCGATCTG
TATGATTTCA GCCGTGAGAG CGAGCCCCAT ACCTACTCTT CTGCGAGAGT TAAATGGGGC
CTGGATGAGG CTCAGTATCT CTATTTTAGT TTCACTCCCT TTGAGTCCAG AGATACCAGT
AAGCTCAACG AAGATATTCA CTTCGGGGGT AAACAGTATC GGGCGGGCAA GGAGGTGGTT
TCGGCTTACC GTCTATACGG TTTAACCGCG GATTACCTGT TTGAGTTATT GCCAAATAGT
GACTGGAAAC TCGATGTGGG TGCCGGGGTG AGCGTTAATC ATCTTTCTAT TCGTTTAGAT
GATATCGAAG GCGACAACTT GAGTGAGCGA GAGGATTGGT TTATCGCCCC GGCGGCCATA
GCCGAAGTGG GTTATCAATT CACCGACAGC ATCTCTGCGA ATATTGGCTA CCGAGCATCA
TTTTCCGGTA CGGCTGATTC TCAAGATGTG TGGGTGAGCT TCGATTATCG GTTTGATGAG
CGCTGGTCTA CCTCCTTGGT TGCGGGTCAG TTTGAGCAGC AAATTGAGAC GAACGAGTTA
ATCAACGATC TGTCTCTGGC TTATGGCGGC TTTACCGTTG CCTATGCCTT CTAG
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| Protein sequence | MKIKIKQIAA AISIGLLSTS ALAQSEIFAG QSGTISDIGD VVQILLPAGG LAGSLWIGDT
EGAWQLTKGV ATTSAITHGL KFSYERLRPD GSEHNSFPSG HTSAAFSGAA YIHHRYGNAW
GIPAYGAAAF VGASRVWANR HYLDDVMAGG SIAVLSSLYW TEPYNQSDFV ISPTIGEGSV
GLSVNYTPGR AGAKSDLSSK HKSDWGKVNK SYRNSYELFI GGADTNENSI QDAGGQAFDL
YDFSRESEPH TYSSARVKWG LDEAQYLYFS FTPFESRDTS KLNEDIHFGG KQYRAGKEVV
SAYRLYGLTA DYLFELLPNS DWKLDVGAGV SVNHLSIRLD DIEGDNLSER EDWFIAPAAI
AEVGYQFTDS ISANIGYRAS FSGTADSQDV WVSFDYRFDE RWSTSLVAGQ FEQQIETNEL
INDLSLAYGG FTVAYAF
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