| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0950 |
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| Symbol | |
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| ID | 5610881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1134306 |
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| End bp | 1134782 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931798 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001472689 |
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| Protein GI | 157374089 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CCAAAATAAT TAAAGTCGAT GATATTTGCT GGGAATCCTG GCAACATTCA
GCTAAATATA CCAGCCAACA AAAACACATA GGCGATGCCG TAGGTTGCGA AAAAATCGGC
GTCACCATGG AGCGCCTCGC CCCGGGAAAG ATATCGACAG TTGCACATTA CCATACCAAA
GAGGAGGAAC ACTTATATGC CCTACAGGGC GAAGCCACCT TGCTTATTAA CGGTGAGCCC
CACCCTTTTA AACAGGGAGA TTATGTCTGT TTTAATGCCG ATACCGCCAT TGCACATACC
CTAAGAAACG ACTCGAATGA AGAGTTTACC TTCCTCGTCA TCGGCAATAG AGATAAGCAC
GATGTCGTTG TCTATCCGGA GAATAATAAG GTGTTAGTCA GGGCCGTCGA TGAAATATAC
GCCAAACGGC CGACGAATTA CTGGGATCCC GATACCGATA CCGATACCGA TAAATAA
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| Protein sequence | MTTTKIIKVD DICWESWQHS AKYTSQQKHI GDAVGCEKIG VTMERLAPGK ISTVAHYHTK
EEEHLYALQG EATLLINGEP HPFKQGDYVC FNADTAIAHT LRNDSNEEFT FLVIGNRDKH
DVVVYPENNK VLVRAVDEIY AKRPTNYWDP DTDTDTDK
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