| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0869 |
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| Symbol | |
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| ID | 5613945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1032397 |
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| End bp | 1033362 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931717 |
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| Product | response regulator |
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| Protein accession | YP_001472608 |
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| Protein GI | 157374008 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG TGTCCCCCGA CAAGTTTATC AGTCGGCTCT ATCGGGAGTC GTCGCGAGTA
TCACTCGAGG ATTTTCCGGT GTGGGCATTA AGTTTTCTGC GACAGGTCAT CAATTTTGAT
GGCGCTATCT GGGGAACGGG GCATGTCTCT ACCAAGGCTT TCCATACACA AACCGCCATC
GATATCTCGA GTGATATCTT CGACCAGTTG AAGGCGAACT TAGCCATCAA CCCTATCTTT
GAAACGCTCT TTTCGACTCA GGGAGGAGCG GTAGATATGC GTGATGTACT CCCGGATGAA
GAGTTCTATG ACTCCGCGCT TTATCACAAC TGTTTCAAAC CATTTGGCAT TGAACGAATA
CTAAGCTCGC TGCATATTGA TGAGCGAAGC GGTATTTTTA CCTTGCTCAC CCTCTACCGT
TACAACCGGG AGGAAGGCTT TACAGCCGAT GAGAAAAACA TTCAGAATCG ATTACTCTAT
CACCTGCTCA GCGCCGCTTC TCATCGACAA CTTTTAGCTC TGAATGAACA GGAGAAAGAC
CTGAGCGATC ACTGCTGCGC CATCTGTGAT TGCGAAGGTA TCTATCATAG TGTCGATTCA
AGTTTTCTCG ATACCTTAGA GTCTCACCTG CAAACACCCA CACAGCAGAA GTTTCCATTC
CCAATAGCGA CACAGGATAA CCGGTTCACC GAAGGAGAAC TTCAATTCAA CCAGACCCGA
ATGGGCGATC TCTACCGGAT ATCCCTACGG ATAAAGAATC AGCTCGATGA GCTCACGACG
AGAGAGAAAC AGATCGTTGC AGGGGTTTGC AAAGGAGGGA CTTTCAAACA GATAGCCCGG
GATCTCGAAC TGTCACCCTC AACCGTTTCT AACCACCTGT ACCGTATCTA CATGAAGTTA
GGGATACATA CCCGCAGTGA ATTGATACTG ATTGCCAACA ACTGCGAATT TTCCCAGTAC
GACTAA
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| Protein sequence | MKKVSPDKFI SRLYRESSRV SLEDFPVWAL SFLRQVINFD GAIWGTGHVS TKAFHTQTAI
DISSDIFDQL KANLAINPIF ETLFSTQGGA VDMRDVLPDE EFYDSALYHN CFKPFGIERI
LSSLHIDERS GIFTLLTLYR YNREEGFTAD EKNIQNRLLY HLLSAASHRQ LLALNEQEKD
LSDHCCAICD CEGIYHSVDS SFLDTLESHL QTPTQQKFPF PIATQDNRFT EGELQFNQTR
MGDLYRISLR IKNQLDELTT REKQIVAGVC KGGTFKQIAR DLELSPSTVS NHLYRIYMKL
GIHTRSELIL IANNCEFSQY D
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