| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0839 |
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| Symbol | |
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| ID | 5612990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 999065 |
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| End bp | 1000048 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931687 |
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| Product | ion transport 2 domain-containing protein |
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| Protein accession | YP_001472578 |
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| Protein GI | 157373978 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA ATACTCCCAC ATGCTGCTAT CACGAAGATG AAGGCTTTTC CTGCTCAGAA
CCCGCAGGAA GCTCTGGATT GTGCTATTGG CATGACCCTA AGATCATTAA AAATAAGCCT
GAGGATATCC ATAATTTAGA GCTGTTCGCC CGAAATGGCG GCATGCTCAG GGGCTTGGCA
CTTAAACGTG CCAAACTGCC CGGCATAGAT CTGGTTAGGC ATCATCAAAA AGTAGGTTTC
GATATGACTC ACGCAGAGTT ATATCGTGCC GACCTTCAAG GTGCACATCT ATTCAACCTC
AATCTTCATA AAGCCAGTTT AATGAAGGCG GATCTCAGAG ACTCGAATGT TCACTGCGCA
AACTTAGTAG GGACTAATCT ATTGGGTATC AAGTGGAATG GCGCCAAGAT TGAGAACATC
ACCACCGGGA CAAAATTAAA ACAAGAAACG TTAGCCTTGG AAGCCGTACG TGTGGGTGAA
AAAGAGATAG CCAGAGATTA TTTTGAGCAG GCAGAAGAGA TCTATCGCGA CCTTCGTAAA
GCCGCCGATC GCGAGGGGCT GTTTGCAATG TCGGGTGACT ATATCCGCAA AGAGCTCACC
ATGCGCCGCC ATCAAATGCC CAAATATAGC TTCCACCGAA TTATCTCAAA AATGATCGAT
CTGTTCTGTG GTTATGGTGA AGCACCGTTA CGGGTGATTG GGTTTTCAAT GGGCCTGATT
ATTGTCTGCG CTATTTTCTA TCTTTTTACC GGCTTGAGTT ACGACGGCAA GATACATGTA
TTCCAACTGA GCAATGACTT TGCCAGCAAT TTATACCTGT TTTTCAACTG TATTTACTAC
TCGGTGGTGA CCTTTACGAC TCTGGGATAC GGTGACTTTA CCCCTATCGG ATTCTCCCGA
GCCATTGCAG CGATAGAAGC ATTTACCGGC AGTTTCACCA TCGCCCTGTT CGTGGTGGTA
TTTGTGAAAA AGATGACAAG ATAA
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| Protein sequence | MTENTPTCCY HEDEGFSCSE PAGSSGLCYW HDPKIIKNKP EDIHNLELFA RNGGMLRGLA
LKRAKLPGID LVRHHQKVGF DMTHAELYRA DLQGAHLFNL NLHKASLMKA DLRDSNVHCA
NLVGTNLLGI KWNGAKIENI TTGTKLKQET LALEAVRVGE KEIARDYFEQ AEEIYRDLRK
AADREGLFAM SGDYIRKELT MRRHQMPKYS FHRIISKMID LFCGYGEAPL RVIGFSMGLI
IVCAIFYLFT GLSYDGKIHV FQLSNDFASN LYLFFNCIYY SVVTFTTLGY GDFTPIGFSR
AIAAIEAFTG SFTIALFVVV FVKKMTR
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