| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0624 |
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| Symbol | |
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| ID | 5613036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 752949 |
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| End bp | 753830 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931469 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472364 |
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| Protein GI | 157373764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTA TCCGCCTGTT TTCCTTTCGC TTTATGCTTA TCTCTTTAGC TATTACCACT
GCTTCTTCAA CAGCATGGGC AGAAGATGCT GACAAAGTGT CGAAATATGA CTATCTGCCC
AGTGACGAAG TGATCTCAAT CGATGTCGGT GAACAAAAAT CTGAGGTACT CATTCGCTCT
TGGGTAGGTA AGAAAAAACT GGGAGCGGCT ATCATGTTTG CCAATACAGG CATGGATGCA
GACTCTGCAG GCCTTCAGGC ATTTCTGAGG CGAGAGTTGA CCCATACGGG ATGGGCAACA
ATCTCGATAA CCCCGCCCAA CAGCGTGATG ACACCGAATT TTGCGACCAG CCCAGAGGAG
GTCGCCAAGG CCGGGGAAGG AAAAGAGATC CAGAAGAGCA GTGAGCCAAC TCAACAGTTC
ACCGATGAAA ACTGGCAAAA AATAAGGGAG AAACAGGAAC TATTTGTCGT TACATCCATG
GACCAACTCG ATGCTTTGGG TAAGCCCTAT CCTGGAAAAC GTATGCTCAT CACGACGGCT
CAGGGAGCGG GTCTGACTAT CTCACTGCTC AGTAAGAATC AACTGCCAAA ACCTGATATA
TTGGTCGTTA TCAATCCATT TATGCGTCAA ATCGATGAGA ACCAGGCCCT ACCTAAATTG
CTGGCCGAGC TGGAGATCCC TGTACTCGAT ATTCAATCGC GAGATGGACA TAGAGCCTCT
CTGGACACGG TAAAGATAAG GCGCGAGCTT TCCCCACATA ACTCACCATA TCGATATAGC
CAGCAACTGA TGTCACTCAA TCTGACTCAG GAGACCGCCT GGCAAACCTG TCTGGAACTG
ATTGAAGGCT TCGCTCAACG AATTAACAAG GCATACCCTT AG
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| Protein sequence | MSLIRLFSFR FMLISLAITT ASSTAWAEDA DKVSKYDYLP SDEVISIDVG EQKSEVLIRS
WVGKKKLGAA IMFANTGMDA DSAGLQAFLR RELTHTGWAT ISITPPNSVM TPNFATSPEE
VAKAGEGKEI QKSSEPTQQF TDENWQKIRE KQELFVVTSM DQLDALGKPY PGKRMLITTA
QGAGLTISLL SKNQLPKPDI LVVINPFMRQ IDENQALPKL LAELEIPVLD IQSRDGHRAS
LDTVKIRREL SPHNSPYRYS QQLMSLNLTQ ETAWQTCLEL IEGFAQRINK AYP
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