| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0538 |
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| Symbol | |
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| ID | 5613682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 657089 |
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| End bp | 658336 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931383 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001472278 |
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| Protein GI | 157373678 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATC TTCGTCAACA AGCCCTCGAT TATCATGAAT TCCCAGTAGC AGGTAAAACC
GCTGTTTGCC TGACTAAACC AGCAGAAACC AGTATGGATC TCGCACTTGC GTATAGCCCG
GGTGTTGCAG AGCCTGTACG TGAAATCGCT GCTAATCCTG ATGATGCTTA TCGTTATACG
GCGAAGGGCA ATACCGTCGC TGTTATCTCA AATGGTACCG CCATTTTGGG ACTAGGCAAT
CTGGGGCCAT TAGCTTCTAA GCCGGTTATG GAAGGCAAGG CGTTGCTATT TAAGCATTTT
GCTAATATTG ATGCGACTGA CATCGAAGTT AAACATCGTA CAGCCGAAGA GTTTATTAAT
ACCGTTGAAG CCATTGCCGA TACATTTGGT GGTATTAACC TTGAAGATAT CAAAGCCCCT
GAGTGTTTCG AAATTGAGAA GGCTTTGATC GAGCGTTGCA ATGTACCTGT GTTCCACGAT
GATCAACACG GTACGGCCAT CGTTACCGCG GCGGGTATGA TCAACGCGCT TGAAATCCAA
GGCAAAGAGA TAGATAAGGC AATCTTTGTC TGTATGGGGG CCGGGGCTGC GGCTATCGCG
TGTATGACAA TGCTGGTTAA GTGTGGCGTT CAGCGTGAAA ATGTCTATAT GCTTGACAGG
AAAGGGGTTA TTCACACCCG TCGTGAAGAT ATCAATGAAT ATAAGGCATT GTTTGCCAAC
AATACTGATA AGCGTACCCT GCAAGAAGTC ATTAAAGGCG CCGATGCGTT CTTAGGCCTG
TCGGGCCCGG ATGTGCTTGC TGCCGAAGAT GTTGCTTTAA TGGCGGATAA ACCGGTTATC
TTTGCTTGTT CAAATCCGGA TCCTGAGATT AGACCCGAGA TAGCACATGA TGTTCGTAAG
GACTTGATCA TGGGCACAGG TCGTAGCGAT TACCCTAACC AAGTCAACAA TGTACTTTGT
TTCCCATTCA TTTTCCGTGG TGCTTTAGAT GTTAGGGCTT CGAGAATTAA CGATGAGATG
AAGATTGCAG CGGTTAATGC CATTGCGGCA CTCGCCAGAG AGGAAGTCCC GGCTTCGGTC
TTAGCGGCTT ATCCGAATGT CAGTGAATTA AGCTTTGGTC CAGATTATGT GATCCCTAAA
CCAATGGATC CACGCTTGCT GTCTAATGTC GCTAAAGCTG TGGCCCAGGC TGCTATCGAT
TCCGGTGTCG CTGCCATCGA AACTTTGCCG GATAATTACA TGCTTTAA
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| Protein sequence | MSDLRQQALD YHEFPVAGKT AVCLTKPAET SMDLALAYSP GVAEPVREIA ANPDDAYRYT
AKGNTVAVIS NGTAILGLGN LGPLASKPVM EGKALLFKHF ANIDATDIEV KHRTAEEFIN
TVEAIADTFG GINLEDIKAP ECFEIEKALI ERCNVPVFHD DQHGTAIVTA AGMINALEIQ
GKEIDKAIFV CMGAGAAAIA CMTMLVKCGV QRENVYMLDR KGVIHTRRED INEYKALFAN
NTDKRTLQEV IKGADAFLGL SGPDVLAAED VALMADKPVI FACSNPDPEI RPEIAHDVRK
DLIMGTGRSD YPNQVNNVLC FPFIFRGALD VRASRINDEM KIAAVNAIAA LAREEVPASV
LAAYPNVSEL SFGPDYVIPK PMDPRLLSNV AKAVAQAAID SGVAAIETLP DNYML
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