Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0483 |
Symbol | |
ID | 5613241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 597859 |
End bp | 598314 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640931328 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001472224 |
Protein GI | 157373624 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGAAG CAAATAAGAG AATCATTATG AATAAAGTAC TTGGAATAAT TATTTTAACT TTCTTTTTAG CTGCACTATC TCCAAATAGT TTTGCTGGGG GAGGTTCTGA TATGGCTCCG GCTAAACATC ATGAATTTCA ACTTAACCAT ATCACCATGG TGGAAGCAGA AACGTTAGTA GGAAAGGAAG GTGTTTACTT TTTTGATGTC AATACATTGG AACTGTGGGC AGAGGGATAT ATTCCAGGTG CTATCTACTT CAATGTTAGA GATTGGAAAA AAATACTACC AGAAAATAAA GATGCTGTGA TGGTTTTTTA TTGTGCGAAT CGTCTCTGTA ATGCAAGTGA AATAGCGGCA AGAGCAGTCA TGAAACTTGG CTATACCGGT GTAAGACAGA TGCCAGATGG TATTTACGGG TGGAGGTTGT CAAATCGACA AACAGAAAGA CCATAA
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Protein sequence | MVEANKRIIM NKVLGIIILT FFLAALSPNS FAGGGSDMAP AKHHEFQLNH ITMVEAETLV GKEGVYFFDV NTLELWAEGY IPGAIYFNVR DWKKILPENK DAVMVFYCAN RLCNASEIAA RAVMKLGYTG VRQMPDGIYG WRLSNRQTER P
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