| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0356 |
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| Symbol | |
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| ID | 5612637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 415350 |
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| End bp | 415970 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931188 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001472097 |
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| Protein GI | 157373497 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0328008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00751458 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAAG CACTAGCTGA AATAACCCCT ATCCTAGCAG CCAATATGTA TCATGACCCT
TGCGATAAGG TGCTTGAGAT GTATAACGAA CATGACTTCA GCGAGTGTTA CCCTCTGCTT
ACTCAGAGTA ACACTCGCAG CGAAGGAGTT GCACTCATAA GCAATTACAT GAAGCAATAC
ACGAGTGAAC AACTACCTAA ACTGCTGCTC GACTTCAATC AGCTGTTTAT TGGTCCTGGT
AAGATGAAAG TCCCATTATG GGGCTCATAC TACCTTAGTG AAGATAACCT GTTGTGTGGG
CCAAGTACTC AGAAACTTCA AGCGCGCATC GATGCTCTAG GTATAGCGAT CAATACCATT
GATGGTGATA ACCAGCCTAT CGACCACATA TCACTCGTTC TCCGACTGGT GGAGTTTGCG
CTTGATGAAG AGAGGAGTTT AGAGCTGAAA GCTATCGTTA CCGAGCATCT TGTCCCCTGG
GCGTATAGAG TGGCAGAGCT AACGATTGAG CACGCTAAAA CAAACTTCTA CTTAGGGTGG
GGATTATTAC TTAAAGATTA TCTAGACGTC TTAGTAGAGT CTAATGGGAT CATAGTGAAA
GAGCATACCC TATGGGGGTA G
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| Protein sequence | MNKALAEITP ILAANMYHDP CDKVLEMYNE HDFSECYPLL TQSNTRSEGV ALISNYMKQY
TSEQLPKLLL DFNQLFIGPG KMKVPLWGSY YLSEDNLLCG PSTQKLQARI DALGIAINTI
DGDNQPIDHI SLVLRLVEFA LDEERSLELK AIVTEHLVPW AYRVAELTIE HAKTNFYLGW
GLLLKDYLDV LVESNGIIVK EHTLWG
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