| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0223 |
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| Symbol | |
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| ID | 5613864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 254948 |
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| End bp | 256462 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931049 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001471964 |
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| Protein GI | 157373364 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGCGT TACTATCTCC GCTTCATCAG AGCGCCAGGC AACACCCCAA CCAAACGGCA
CTGACCTATA TTCAAGATGG GGTTAACCGA CAGATTGACT ACTCGACACT GAGTCAGAGA
GTCATTGCGC TCGGCGAGCA GTTAATCGCA AAGGGGCTTG CTAAAGGTGA CCGCCTTGCC
TGTATCGATA ACAACTCCGT CGAGTTAGTC ATGCTTTACT GGGCCTGTAT CGATCATCAG
ATCCTATTTT GCCCCCTATC ACCCCGCTTT CCGGCAAGTC AGGTTTCGGC GCTCATTGAG
TCACATCGGC TAAATTTTCT ATGGACGGGA GAAGGCTTCA CCGAATTGGC ATCTGAGCTC
TCAGTATCGA GGAGCGGCTC CGGCACTAAC ACTGTCACAG TCACTCCAAG GGCTATGACA
CTGAATTTCT CCTTAACAGC AGATAATACT CCGACTCCTA TCGATCACTA CGCACCCGCC
AATATAATCC TGACCTCGGG AAGCAGTGGC CAACCTAAGG CCGCGGTTCA CAGCCTTAGC
AACCATAAGG CGAGCGCCGA GGGTTCGAGG AGCCTGATAT CACTCGAGCC AGGTGATGTC
TGGCTATTGT CACTGCCGCT TTTTCATATA GGTGGACTAG CCATTATCAA TCGCTGTGCC
TTCGTTGGGG CTACTGTGGT ACTGCAAGAC CGGGATGTAG GCCTTTCTAT ACAGATATCA
CGAGATCAGA TCACTCACCT CTCTCTGGTC TCCACTCAGC TGGTACGCTT GCTAAAGGAA
GATGCTGACA GCCTCAAAGG GGTAAAATCA CTTCTTCTCG GCGGCGGAGC CATATCATCG
TCTCTTCTGG GCCAATTGAA CGCCCTCTCG ATTAACAGCT TCACCAGTTA TGGCATGACC
GAGATGGCCT CTCAAGTCAC CACGGGGCCA GCCAACAGTG ATGGCAGCAG TGGTCGACTC
TTGCCATCAA GAGAGCTGAA GATTATCGAT GAGAAGATCT ATGTGAAGGG GGAGACACTC
TTCCTCGGCT ATCTCGATGC GCAGGCCCAG ACTCATGAGC AAAATAGTTG TGCAGATGAC
GTTTGCAAAC TCATTCGCCC CACAGATGAG GATGGCTGGT TTTTTACCAA GGATAGAGGA
TATTGGGATG CAGCCGGCAA GCTTCATATT CTGGGACGCA TCGATAATAT GTTTATCTGT
GGCGGGGAGA ACCTGCAACC CGAAGAGGTG GAGGCCGCAC TCAAACAGCA TCCGGCTATC
GAAGATGCCA TCGTATTTGC TCAGGCAGAT GAGGAGTTTG GTAACCTTCC CGCAGCAATA
ATAAAAGTGA GCCACTCCAA AAGTGCAAAG CCATCTTGTG ATGAGCTAAC TCAATTCCTC
GCCGATAAGG TAGCCAGATT TAAGCGACCC AGAGTCTATT ATACTTGGCC AAATATTGAA
TCGACCAGCC TGAAGGTATC GAGAAAGCAG GTTATAGAGG CAGTATTGAA GAAGGTTCTA
GGTTCTAAAA GCTAA
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| Protein sequence | MKALLSPLHQ SARQHPNQTA LTYIQDGVNR QIDYSTLSQR VIALGEQLIA KGLAKGDRLA
CIDNNSVELV MLYWACIDHQ ILFCPLSPRF PASQVSALIE SHRLNFLWTG EGFTELASEL
SVSRSGSGTN TVTVTPRAMT LNFSLTADNT PTPIDHYAPA NIILTSGSSG QPKAAVHSLS
NHKASAEGSR SLISLEPGDV WLLSLPLFHI GGLAIINRCA FVGATVVLQD RDVGLSIQIS
RDQITHLSLV STQLVRLLKE DADSLKGVKS LLLGGGAISS SLLGQLNALS INSFTSYGMT
EMASQVTTGP ANSDGSSGRL LPSRELKIID EKIYVKGETL FLGYLDAQAQ THEQNSCADD
VCKLIRPTDE DGWFFTKDRG YWDAAGKLHI LGRIDNMFIC GGENLQPEEV EAALKQHPAI
EDAIVFAQAD EEFGNLPAAI IKVSHSKSAK PSCDELTQFL ADKVARFKRP RVYYTWPNIE
STSLKVSRKQ VIEAVLKKVL GSKS
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