4 homologs were found in PanDaTox collection
for query gene Sros_R0016 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_R0016  tRNA-Leu  100 
 
 
73 bp  145  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.207081 
 
 
-
 
NC_008578  Acel_R0047  tRNA-Leu  91.67 
 
 
73 bp  63.9  0.000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0101821  hitchhiker  0.0000000869798 
 
 
-
 
NC_013235  Namu_R0025  tRNA-Leu  85.14 
 
 
74 bp  52  0.00002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0115082  normal  0.081764 
 
 
-
 
NC_013159  Svir_28960  tRNA-Leu  87.23 
 
 
77 bp  46.1  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.363036 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>