Gene Sros_9353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9353 
Symbol 
ID8672704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10302637 
End bp10303497 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID 
Productamino acid ABC transporter, periplasmic-binding protein, putative 
Protein accessionYP_003344714 
Protein GI271970518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.663488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGTC CTTCGATGCT GCTCGCGCTC GGCGCCCTCG CGGTGGCCGC CGTAGCATGT 
GCGCCGGCCT CGGAAACGGC GGTCAAGGCA GCCCCCTCCG CCCCGGCCAC CTGCGCCAAG
GACCAGCTCA CGCTGAAGAC CCCGGGCAAG CTGACCATCG GCACCGACAA GCCCGCCTAC
GAGCCGTGGT TCAAGGACGA CGACCCGGCC AACGGCAAGG GCTTCGAGAG CGCGGTGGCC
CACGCCGTCG CCAAGCAGCT CGGCTTCGAG AGCGGCGAGG TGGCCTGGGC CACGGTGAAG
TTCGACACCG CGTTCGCCCC CGGCGCCAAG CAGTTCGACT TCGACCTCAA CCAGGTCTCC
GTGACCCCTG ACCGGGCCAA GGTCGTCGAC TTCAGCAAGG GCTACTACAC GGTCAAGCAG
GCCGTGGTCG CGCTGGACGG CTCCAAGGCC GCCTCCGCGA CGGACCTGGC CGCCCTCAAG
GACGCCAAGA TCGGCGTGCA GGTCGGCACC ACCTCGCTGC AGGCGGTCAA GGACGTCATC
AAGCCGGCGG CCGAGCCGAA CGTCTACAAC GAGCAGATCG ACGCGGTGAA CGCGCTGAAG
AACAAGCAGG TCGACGCGGT GGTGGTGGAC CTGCCCACCG CCTTCTACGT GACCGCCGCC
CAGGTCGAGA ACTCCAAGAT CGTCGGCCAG TTCGGCGCCG CCTCCGGCAC GCCCGAGGTC
TTCGGCGCGG TCTTCGAGAA GGGCAGCCCG CTGGTGGGCT GCGTGAACGA GGCGATCGAC
AAGCTGACCT CCTCCGGCGA GCTCGCCAAG ATCGAGACCG AATGGCTCGG CTCGGCCGCG
GGTGCCCCGG AGCTGAAGTG A
 
Protein sequence
MVRPSMLLAL GALAVAAVAC APASETAVKA APSAPATCAK DQLTLKTPGK LTIGTDKPAY 
EPWFKDDDPA NGKGFESAVA HAVAKQLGFE SGEVAWATVK FDTAFAPGAK QFDFDLNQVS
VTPDRAKVVD FSKGYYTVKQ AVVALDGSKA ASATDLAALK DAKIGVQVGT TSLQAVKDVI
KPAAEPNVYN EQIDAVNALK NKQVDAVVVD LPTAFYVTAA QVENSKIVGQ FGAASGTPEV
FGAVFEKGSP LVGCVNEAID KLTSSGELAK IETEWLGSAA GAPELK