Gene Sros_8103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8103 
Symbol 
ID8671431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8929796 
End bp8930977 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID 
ProductCell wall-associated hydrolase (invasion- associated protein)-like protein 
Protein accessionYP_003343501 
Protein GI271969305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACCGCGGATC GCTGACCGAC AGGGACGGCG ACAGGGAACC GATCACTCCC 
GTCGTCCCGG GCAGCTCGGA ACTGCTCACC ATCGCCATGA AGGTCAACGG CGCGAAGGAC
TCGATCACCA CGATCGCCAA GCGGTGGCGG ACCACCGCGG GCAACCTGAA CGACCACGCC
ATCGAGCTCA CCCGCGCGGT GAACACGGTG GACCACTCCT GGCAGGGCGA CTCAGCGGAC
GCCTTCGACG ACTACATGCG CAAGTACCGC AAGGCCGGCG ACGCGCTGCA TGTCGCTCTC
ACCGACTGCG CGGGCGCGCT CGACACCGCC GCCGGCGCGC TCGACACCGC CGAGACCAAG
GTGAAGACCC TCACCGAGAA CCTCGTCACC GAGTGGAACA CCTACCGCAC CAACAACAGC
AAAAACGCCG ACGGCTCCAC CAGGACCGAG GCGGAACTCG CGGCGGGGAT CAAACCGTCG
GTCGACACGG CCGTCTCCAA CGCCCGCCTC CAGCTCGACA ACGCCGACAA GGCCGTCACC
AAGGCGACGA CCGACCTGAA GAAGTACATG GACGAGCGGT CGATCCACTT CAGCGACATC
CCCGCGGTCG GCGACCAGAA GTTCATGGCG CCCGACCGCG TCCTCCACTG GGAGAAGACC
CCTCTGGCCA ACCCGGGACA GACGACGCTC GCCGGCACGA ACGGCGGCAA CGGCGGCAAC
GGCGGCAACG GCGCGAGCCT TTCCGGGAGC GGCGGCTCCG GCGGCAACGG CCCGGCGGGC
GGCGATCCGG GCGGCCCCGC GCAGGCGCTG CCGTACGTAC CGGGGTCCGG GAGCGGAGCC
GCGATCGTGG CCGCCGCGCA GAAACACATC GGGAAACCCT ATGTCTGGGG CGCCGACGGG
CCGTCGGCCT TCGACTGCAG CGGGCTCGTC TACTACACCC TGAACCAGGC CGGAATCAAG
ATCGGCGACA CCACCGCCGC CGGCTACCAG GCGAGCGGGC AGCCCATCAC GCCCCCGCCG
CAGCCCGGGG ACATCGTGTT CTTCGGGGAT CCCGCGACCC ACGTCGGGAT CTACGCCGGC
GAGGGCAAGA TGATCCATGC GCCTCGCCCG GGAACGATGG TCAGGGTGGA GGACGTGGCG
GGGGCGGCGG CGGGGCCCAT CACCTACCGG CGTTTCACGT GA
 
Protein sequence
MSDDRGSLTD RDGDREPITP VVPGSSELLT IAMKVNGAKD SITTIAKRWR TTAGNLNDHA 
IELTRAVNTV DHSWQGDSAD AFDDYMRKYR KAGDALHVAL TDCAGALDTA AGALDTAETK
VKTLTENLVT EWNTYRTNNS KNADGSTRTE AELAAGIKPS VDTAVSNARL QLDNADKAVT
KATTDLKKYM DERSIHFSDI PAVGDQKFMA PDRVLHWEKT PLANPGQTTL AGTNGGNGGN
GGNGASLSGS GGSGGNGPAG GDPGGPAQAL PYVPGSGSGA AIVAAAQKHI GKPYVWGADG
PSAFDCSGLV YYTLNQAGIK IGDTTAAGYQ ASGQPITPPP QPGDIVFFGD PATHVGIYAG
EGKMIHAPRP GTMVRVEDVA GAAAGPITYR RFT