Gene Sros_6587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6587 
Symbol 
ID8669896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7249714 
End bp7251453 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003342042 
Protein GI271967846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGT GGCTACCACA CGCCTTCTCC GGCGACTCCG CCGAGGTTCC CGTCGGAGGA 
CTGGACGTGA GAATCTCCGG GGCTCGCGAC ATCGCGGTCA CGCACGTCGC CGACGGGGTC
TGGGTGATCG ACGCACCGGG CGCGACAGGG GCGCAGTGGC GCGTTCCGTG CGTCTCGACG
ACCGCGTTCT GGACGCCGGG CAGCGGTCCC CGGTGGGTGC CGCCGATCTG GAGCGGGCCG
AAGACGTCCC GGCTGACCGC CGGCGCGCCG GTGGTCTCCC TGGTCGGCAC GGGCGACGCG
AACGTGTGCA CCGCGGCACT CGACGGATCG GCGGCCCTGT CCCGGTTCAG CGGCGGGCTG
ATCGAGGAGA CCGGCGAGTT CGTGTTCACG ATCGATCACG AGGGTCCGGC GTTCCGGCTG
CGGCTGGACC TTTCGGCGGG GCCGTTCTCG GCGGCGCTGG CCGGGGTGGC GACCTGGTGG
GGCGAGGGCC GGGAGCTGCC GCAGACGCCG CGCGCGGCCC GGCTGCCGGC GTACTCGACC
TGGTACGGCA TGCACCAGGA GGTCAGCGAG GAGTCGGTGG AACTCCAGTC GCGGCTCTCG
AAGGAGCTGG GCTGCGAGAC GATCATCGTG GACGACGGCT GGCAGACCGC CGACCGGGCG
CGGGGGTACG CGTTCTGCGG CGACTGGGAG CCGAATTTGG CAGCTTTTCC CGATATTTCC
GCACACGTGA AGCGGGTGCA GGGCATCGGA CAGGCCTACA TGCTCTGGTA CGCCATCCCG
TTCGTCGGCA AGGAAAACGC CGCGTTCGAG CGCTTCGAGG GCAAGTTCCT GCGCTACCTC
GACCACATGG ACGCCGGGGT GCTCGACCCG CGTCATCCCG ACGTCCGCGA GTTCCTCATC
GACCGGCTGT CCCAGGCGGT CGAGAAATGG GACATGGACG GCCTGAAGAT CGACTTCGTG
GAGCAGTTCG CGACGCCGGG CGGCGACCCC GCCCCCGGCG AGGGGACCGA CTGCGAGGAG
GTGGATGAGG GTGTGCGGCG CCTGCTGCAC GAGTTGGACA CACGGCTGCG CCGTACCAGG
CCCGAGGTGC TGATCGAGCA CCGCCAGCCG TACACGCACC CGGGCCTGTG GCCGTACGCG
AACATGGTCA GGGCCACCGA CTGCCCGCTC AGCTCGCAGG AGAACCGGCA GCGGACCGTG
GACCTGCGGC TGACCGCCGG TCCCGTCGCC GTGCACTCCG ACATGATCCT GTGGCACCCG
TCCGAGCCCG CCGAACAGGT CGCGGTCCAT CTGATCAACG CGTTGTTCTC GGTGCCGCAG
ATCTCCGTGG ACCTCACCGC CCAGACCTCC GAGCAACTCG CCGCCATCGG GTTCTGGCTG
GGGATCTTCC GGCAGCACCT GGAGACGCTC CAGCTCGGCG TGCTGGAACC GGCTCAGCCG
GAGCATGGTT ATCCCCTCGT GCGGGCCTAC GATGAGCAGA CCATGGTCAT CGCCCGCTAC
GGGCCGCTGC CGGTGGAGGT CCCCGCCTCC GGCTGGCGCG AGTTCCTGGT CGCCAACGCC
GCCCCGGACT CTCGCGTGGT GCTGCTCGGC GCGGATGCGG AGAGCCTGCA GGCGACCGTG
CACGACTGCG GCGGAAGGCT GCTGTCGGCC GCCACGCTGC ACCTGGACGC CGGAGCGAAC
CTGGTCACCG TGCCGATGGG CGGACTGCTG AAGCTGCGCC GCCGTACCGA GGAGGAATAG
 
Protein sequence
MQLWLPHAFS GDSAEVPVGG LDVRISGARD IAVTHVADGV WVIDAPGATG AQWRVPCVST 
TAFWTPGSGP RWVPPIWSGP KTSRLTAGAP VVSLVGTGDA NVCTAALDGS AALSRFSGGL
IEETGEFVFT IDHEGPAFRL RLDLSAGPFS AALAGVATWW GEGRELPQTP RAARLPAYST
WYGMHQEVSE ESVELQSRLS KELGCETIIV DDGWQTADRA RGYAFCGDWE PNLAAFPDIS
AHVKRVQGIG QAYMLWYAIP FVGKENAAFE RFEGKFLRYL DHMDAGVLDP RHPDVREFLI
DRLSQAVEKW DMDGLKIDFV EQFATPGGDP APGEGTDCEE VDEGVRRLLH ELDTRLRRTR
PEVLIEHRQP YTHPGLWPYA NMVRATDCPL SSQENRQRTV DLRLTAGPVA VHSDMILWHP
SEPAEQVAVH LINALFSVPQ ISVDLTAQTS EQLAAIGFWL GIFRQHLETL QLGVLEPAQP
EHGYPLVRAY DEQTMVIARY GPLPVEVPAS GWREFLVANA APDSRVVLLG ADAESLQATV
HDCGGRLLSA ATLHLDAGAN LVTVPMGGLL KLRRRTEEE