Gene Sros_5465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5465 
Symbol 
ID8668759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5986498 
End bp5987085 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340965 
Protein GI271966769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0907428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGA ACGGCATGAC GAGCCCGCGC CGCGAGCGGG CCGACGCGGC GCGCAACCGG 
GTGAAGATCC TCACCGCCGC CGCCGAGATC GTCACCACTC ACGGTGTCGA GGGGCTGTCG
ATGGCGGAGG TGGCCGCCGC CGCGGGAGTC GGCGTCGGCA CGCTGTACCG CCGGTTCGGC
GACCGTTCGG GGCTGGCCTA CGCGCTCATC GACGAGCGGG AACGCGAGTT CCAGGCGGCC
TTCATCGAGG GTCCGCCACC CCTCGGGCCC GGCGTCGAGG CGCCGGCCCG CATCCGCGCC
TTCCTGCACG CCCTGACCGA CCGGACCGTG GAGCAGCTGG ATCTGCTGCT GATGGCCGAG
ACGGCGGCCC CGCTCGCCCG TTTCGGCGGC GCCTACGACG GCTACCACGC ACACCTGTCG
ATGCTCATCG CCCAGGCCAG ACCCGGCGCC GACGCCTACG TCCTGGCCGA CGCCCTGCTG
GCCCCGCTGG CCGCCCCGCT GCTCGCGCAC CGCCTGCGCG GCCGCGGGGT GACGGCCGAG
CGCGTCAAGG CAGGACTGGA CGGCCTGCTG GCCGGATTCA CCACCTGA
 
Protein sequence
MTVNGMTSPR RERADAARNR VKILTAAAEI VTTHGVEGLS MAEVAAAAGV GVGTLYRRFG 
DRSGLAYALI DEREREFQAA FIEGPPPLGP GVEAPARIRA FLHALTDRTV EQLDLLLMAE
TAAPLARFGG AYDGYHAHLS MLIAQARPGA DAYVLADALL APLAAPLLAH RLRGRGVTAE
RVKAGLDGLL AGFTT