Gene Sros_5426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5426 
Symbol 
ID8668720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5946561 
End bp5948252 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340929 
Protein GI271966733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCG TTGATCCCTC AGGTGACGAC TCCGGCCCGG GTACGGCCGA ACGGCCGTTC 
GCCACGTTGG ACCGGGCCCG CGCGGCGGCG GCGCCGGGCA GCGTGGTCAA CCTCAGGGCC
GGCACCCACC GCCTCACCGA ACCGTTCCGG CTCTCGGCCG CCGACTCCGG CGTCGTCTAC
CAGGCCTACG GCTACGGCAC CGCCGCGCAG GAGAAGGTCG TGGTCAGCGG CGGCCGGAGG
ATCACCGGCC GGCGCCGGGA CGACGACGGC GTCTGGCGGT CCGAGGCTCC CGGCCTGGCC
ACCCGCCAGC TCTACGTCTC CGGACGCCGC GCCGTACGGG CCGCCATCGC CCTCGACCAG
AACCTGACCA GGACCGAGAC CGGTTACGTC ATCAACGACC CCGCGCCCCG GTCCTGGCAG
GGCGAGGTGG AGTTCGTCTA CCGGGGCGCC TATCCCTGGT CCGAGGCCCG CTGCCCGGTG
GCGCGGATCT CCGGGGACGG GCGCTCGACC ACCGTCACGA TGGCGCAGCC CGCCTTCGGC
TGGGCGGCCC GCCTCTACCA GTCGGTCATC ACCTGGGACG GCCCGGGCGC CGGGGAGACC
AACGGCGCCG ATGCCCCCAC CTCGGCCGAG AACAGCCCCG CGTTCCTGAC CGAGGGCACC
TTCGCGCTGG CCGGCGGCGT CCTGCACTAC CTGCCGCTGC CGGGTGAGGA TCTCGACGAC
GTGGTCGCGC CGGTGCTGGA GACGCTGCTG CACGCCCGGG ACGTGCACGA CGTCGCCTTC
CTCGGCATCA CCTTCGCGGA GGCGACCTGG CTGCGGCCCA GCGCGCCGGA GGGTTTCCTG
CACTACCACG GCAACGGCTA CTACGACGGC GGCCCGCTCC AGACGGTCAC CTTCGCCGAA
GGCCAGGGGC AGGTCACCGT CCCCGGCGAC TCCGCGGCCA TGCCCGGTAA CGTGATCTTC
GAGAACTCCT CGCGGGTCAC GCTGGAGGGC TGCCGGTTCA CCCGGCTGGG CGCGGTCGCG
CTGGAGTTCC GCGGCGACGG CGTGGGCAAC GTGCTGCGCG ACAGCGTGGT GGACGAGGTG
TCCGGCGGCG GCGTGGTGAT CGGCTCGGGG GCGCGCCACC ACCGGGTCGA GAACAACCAC
GTCCACCATG TCGGCCGTGA CTACCACGGC TCACCCGCCA TCCTGCTGTC CGGCACCCAG
GACACCGTCG TGGCGCACAA CCAGGTCAAC GACGTGCCGC ACGCGGGCAT CGTGGTGTAT
GAGGGGCGCG GCGCCCAGGT GCTGAACAAC CTGGTGCACG ACACGATGCA GGTGCTGGCC
GACGGCGGCG GCGTCTACCT GTCCGGCAGC CAGGGCGCCT CGTACGCCAG CGGCGCGCTG
GTCCGCGGCA ACGTCGTCCG GGACACGATC ACTCCTTACA ACTTCGGCCT CTACACCGAC
TACGGCGCCG CCTGGGTCAC CGTCCAGGGC AACGTCGTCC ACCGGGCCGA CACCCCGGTG
GTGCTGAACG TGTCGCCGCC GCTGGAGCAC GTGGCGTTCA TCGGCAACTT CTGGGACGCC
GACCCCGGCG ATCCCCCCGG GGGTGTGACA CTCGCCGACA ACACGACGCT GTCGGGGAAG
GCGCTCGACG ACGACCCGAC GGTCGCCGAC ATCGTGGCCG GCGCGGGGCT CGGCGGCCCT
CGCCGGGCAT GA
 
Protein sequence
MLFVDPSGDD SGPGTAERPF ATLDRARAAA APGSVVNLRA GTHRLTEPFR LSAADSGVVY 
QAYGYGTAAQ EKVVVSGGRR ITGRRRDDDG VWRSEAPGLA TRQLYVSGRR AVRAAIALDQ
NLTRTETGYV INDPAPRSWQ GEVEFVYRGA YPWSEARCPV ARISGDGRST TVTMAQPAFG
WAARLYQSVI TWDGPGAGET NGADAPTSAE NSPAFLTEGT FALAGGVLHY LPLPGEDLDD
VVAPVLETLL HARDVHDVAF LGITFAEATW LRPSAPEGFL HYHGNGYYDG GPLQTVTFAE
GQGQVTVPGD SAAMPGNVIF ENSSRVTLEG CRFTRLGAVA LEFRGDGVGN VLRDSVVDEV
SGGGVVIGSG ARHHRVENNH VHHVGRDYHG SPAILLSGTQ DTVVAHNQVN DVPHAGIVVY
EGRGAQVLNN LVHDTMQVLA DGGGVYLSGS QGASYASGAL VRGNVVRDTI TPYNFGLYTD
YGAAWVTVQG NVVHRADTPV VLNVSPPLEH VAFIGNFWDA DPGDPPGGVT LADNTTLSGK
ALDDDPTVAD IVAGAGLGGP RRA