Gene Sros_5421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5421 
Symbol 
ID8668715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5940638 
End bp5941423 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340924 
Protein GI271966728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0285606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGC GGGAGCTCCA CGGCAAGGCT GGGCGCGTGA CTCCTCGAAC CTCGCATCTC 
CTCGCGGCGG GCCTCGTCCT TCTGGCGGCC ACCGGCTGCG GCGACCTCGG CTCCGCCTCC
CACGAGCGGC GCGACTCACG TGACTTCCCC TACTCGGCGG CGAAACTGGT GATCAAGGCG
ACGGGCACCC CGGTCCGTCT CGAACCCGGC GCCCCCGGCA CGCTCCGGGT CGACAGGCTG
CTCACGGGCA AGGCCGCCGA CGAGGGGAAC GCCTCTTGGT CGCTGGAGGG CGGCACCCTG
GCGGTGGGCA TCGTCTGCTC CGGCATCGTG ATCAACTGCG ACTCCCAGCA CACGATCAAG
GTGCCGCCGG GCGTGACGAT CGAGGTCGGC AGCGATGACG ACGTGAACGC CGTCCGCCTC
CCCCAGGCAC TGACCGTCAC CACCAGGGAC GGCAACGTGC GCACCGACGC CGTCTCCGGG
CCGATGCGCC TGGTCAGCCA GAGCGGCAAG GTGACTGCGC GGAGGATCCG CTCGGCCGAC
GTCACCGCGC GCTCGTCCGA CGGCCTCGTC GCCCTCTATT TCGCGACGGT TCCCAGCCGG
GTGGAGGCGG TCTCCGACAG CGGAACCGTC GACGTGGTGG TGCCGGAGAC CCGCGACGCC
TACCGCGTCG ATGTCTCCAG CAAGGACGGC ACGGCCACGT CCCGCGTGCC CCGCGCCTCT
TCCGCCCCGC GTTCCCTGCA CGCGCGATCC GGCGAGGGCG ACGTCCGCGT ACGGCAGGCG
GGGTAG
 
Protein sequence
MGGRELHGKA GRVTPRTSHL LAAGLVLLAA TGCGDLGSAS HERRDSRDFP YSAAKLVIKA 
TGTPVRLEPG APGTLRVDRL LTGKAADEGN ASWSLEGGTL AVGIVCSGIV INCDSQHTIK
VPPGVTIEVG SDDDVNAVRL PQALTVTTRD GNVRTDAVSG PMRLVSQSGK VTARRIRSAD
VTARSSDGLV ALYFATVPSR VEAVSDSGTV DVVVPETRDA YRVDVSSKDG TATSRVPRAS
SAPRSLHARS GEGDVRVRQA G