Gene Sros_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5030 
Symbol 
ID8668324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5554731 
End bp5555291 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003340565 
Protein GI271966369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0593911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00786893 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCACACA CTTCCGCGCT CCTCGTCATC GACATGCAGA ACGCCCCGGT GGCCATCGCC 
TACCGGGCCG CCGAGACCGT CGCCGTGATC GCCGGATTGC GTGAACGGGC CAGAGTCGCC
GGCGTACCGG TGGTAATGAT TCAAGACCAG GGCGCCGGGA TGGAAGCCGG GACCGAGGGC
TGGCGGATCG TGCCCGAACT CGCGCCCGCC GCCGACGAGG CTGTCGTCCA CAAGGCCAGC
CCGGACAGCT TCCTGGACAC CGATCTCGAC AAGGTCCTGA AGGTGCTGGG AGTCACCGAG
GTGGTCGTCA CCGGGTTCGC GACCGAGATC TGTGTGGACA CCACGGCGCG GCAGGCGCTG
AGCCACCGGT ACGACCTGGT GCTGGTCGCC GACGGGCACA CCACGTCCGT CCGGCTCGAC
GGTGGCGAGT ACGCCTCGCC GGGGCAGTCG ATCGCGCACC ACAACGAGAT CTTCCGGAAC
ATCGACTTCC CCGGGCGGAG CATCCGGGTG CTGCCCGCGT CCGAAGTGGT CTTCGCTGCG
GCCGAGAACC TGTCCAGGTA G
 
Protein sequence
MSHTSALLVI DMQNAPVAIA YRAAETVAVI AGLRERARVA GVPVVMIQDQ GAGMEAGTEG 
WRIVPELAPA ADEAVVHKAS PDSFLDTDLD KVLKVLGVTE VVVTGFATEI CVDTTARQAL
SHRYDLVLVA DGHTTSVRLD GGEYASPGQS IAHHNEIFRN IDFPGRSIRV LPASEVVFAA
AENLSR