Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5030 |
Symbol | |
ID | 8668324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5554731 |
End bp | 5555291 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | isochorismatase hydrolase |
Protein accession | YP_003340565 |
Protein GI | 271966369 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0593911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00786893 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCACACA CTTCCGCGCT CCTCGTCATC GACATGCAGA ACGCCCCGGT GGCCATCGCC TACCGGGCCG CCGAGACCGT CGCCGTGATC GCCGGATTGC GTGAACGGGC CAGAGTCGCC GGCGTACCGG TGGTAATGAT TCAAGACCAG GGCGCCGGGA TGGAAGCCGG GACCGAGGGC TGGCGGATCG TGCCCGAACT CGCGCCCGCC GCCGACGAGG CTGTCGTCCA CAAGGCCAGC CCGGACAGCT TCCTGGACAC CGATCTCGAC AAGGTCCTGA AGGTGCTGGG AGTCACCGAG GTGGTCGTCA CCGGGTTCGC GACCGAGATC TGTGTGGACA CCACGGCGCG GCAGGCGCTG AGCCACCGGT ACGACCTGGT GCTGGTCGCC GACGGGCACA CCACGTCCGT CCGGCTCGAC GGTGGCGAGT ACGCCTCGCC GGGGCAGTCG ATCGCGCACC ACAACGAGAT CTTCCGGAAC ATCGACTTCC CCGGGCGGAG CATCCGGGTG CTGCCCGCGT CCGAAGTGGT CTTCGCTGCG GCCGAGAACC TGTCCAGGTA G
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Protein sequence | MSHTSALLVI DMQNAPVAIA YRAAETVAVI AGLRERARVA GVPVVMIQDQ GAGMEAGTEG WRIVPELAPA ADEAVVHKAS PDSFLDTDLD KVLKVLGVTE VVVTGFATEI CVDTTARQAL SHRYDLVLVA DGHTTSVRLD GGEYASPGQS IAHHNEIFRN IDFPGRSIRV LPASEVVFAA AENLSR
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