Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4572 |
Symbol | |
ID | 8667866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5086158 |
End bp | 5086829 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340177 |
Protein GI | 271965981 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.145324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.111989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCCAG AGAAACTGAC CCGCCAGGCC GTCATCGAGC GGGCGTTGAG GCTTGCCGAC ACCGAAGGGC TCCCGGCGGT CACCATCCGC CGGCTCGCCG CCGAGCTCGG TGTCGCGCCC ACGGCGCTGT ACTGGCACGT CAAGAACAAG GACGAGCTGC TCTCCGCGCT CGCCGACCGC CTGCTCGCGG CGCTCGTCGC CGACGTGGAC CCGGACCGGC CCTGGAACCA GCGTCTCCGC GCCATGGTCA CCACGCTGGT GGAGCAGACG CGTGCGCACC CGTACCTGTC CACCCTGCTA CCGATGATCG ACAAGAGCGT GGCCGAGGAA TACCGCCGGG CCACCGACAC CGCGATCGGG CTGCTCACCG AGGCCGGGTT CACGCTCCAG GAAGCCGACC AGGTGGCCAC CTATCTGCTC CTGGGGGCCG TGGCGATGGT GTCCTGCCAG CCCGGCGGCG TGGGAAGCGA CGAGGAGGAG GCCGCGGAGT TCAGGCGGCA CCATCGCCTC GACCTGGAAC GTCTCCCTCC CGGTCGTTAC CCCAACCTGG CCGCCTTCGC CGCCACCCTC TCCGCCCCCC CTGACCTCGT CGCCTACTAC TCCTTCGGCA TCGACCTCCT GCTGTCCGCG GTGGAGACCA CGGCCCCGAA CGGACGAGGA GTTCGCCGAT GA
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Protein sequence | MAPEKLTRQA VIERALRLAD TEGLPAVTIR RLAAELGVAP TALYWHVKNK DELLSALADR LLAALVADVD PDRPWNQRLR AMVTTLVEQT RAHPYLSTLL PMIDKSVAEE YRRATDTAIG LLTEAGFTLQ EADQVATYLL LGAVAMVSCQ PGGVGSDEEE AAEFRRHHRL DLERLPPGRY PNLAAFAATL SAPPDLVAYY SFGIDLLLSA VETTAPNGRG VRR
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