Gene Sros_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4572 
Symbol 
ID8667866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5086158 
End bp5086829 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340177 
Protein GI271965981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.145324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.111989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCCAG AGAAACTGAC CCGCCAGGCC GTCATCGAGC GGGCGTTGAG GCTTGCCGAC 
ACCGAAGGGC TCCCGGCGGT CACCATCCGC CGGCTCGCCG CCGAGCTCGG TGTCGCGCCC
ACGGCGCTGT ACTGGCACGT CAAGAACAAG GACGAGCTGC TCTCCGCGCT CGCCGACCGC
CTGCTCGCGG CGCTCGTCGC CGACGTGGAC CCGGACCGGC CCTGGAACCA GCGTCTCCGC
GCCATGGTCA CCACGCTGGT GGAGCAGACG CGTGCGCACC CGTACCTGTC CACCCTGCTA
CCGATGATCG ACAAGAGCGT GGCCGAGGAA TACCGCCGGG CCACCGACAC CGCGATCGGG
CTGCTCACCG AGGCCGGGTT CACGCTCCAG GAAGCCGACC AGGTGGCCAC CTATCTGCTC
CTGGGGGCCG TGGCGATGGT GTCCTGCCAG CCCGGCGGCG TGGGAAGCGA CGAGGAGGAG
GCCGCGGAGT TCAGGCGGCA CCATCGCCTC GACCTGGAAC GTCTCCCTCC CGGTCGTTAC
CCCAACCTGG CCGCCTTCGC CGCCACCCTC TCCGCCCCCC CTGACCTCGT CGCCTACTAC
TCCTTCGGCA TCGACCTCCT GCTGTCCGCG GTGGAGACCA CGGCCCCGAA CGGACGAGGA
GTTCGCCGAT GA
 
Protein sequence
MAPEKLTRQA VIERALRLAD TEGLPAVTIR RLAAELGVAP TALYWHVKNK DELLSALADR 
LLAALVADVD PDRPWNQRLR AMVTTLVEQT RAHPYLSTLL PMIDKSVAEE YRRATDTAIG
LLTEAGFTLQ EADQVATYLL LGAVAMVSCQ PGGVGSDEEE AAEFRRHHRL DLERLPPGRY
PNLAAFAATL SAPPDLVAYY SFGIDLLLSA VETTAPNGRG VRR