Gene Sros_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4516 
Symbol 
ID8667810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5036070 
End bp5036765 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative secreted protein 
Protein accessionYP_003340124 
Protein GI271965928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.465433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CAGTTTTCGG AGCCAATGGT CCCACCGGCC GGCTGGTCAC CGGCCAGGCA 
CTTGCCGCCG GGCATCAGGT CGCCGCGGTC ACCCGACAGC CGGACTCGTT TCCGCTGCAC
CATGATCGCC TTGAGGTGGT CGGTGCCGAC GTGCTCGATC CGGTGGCCGT CGACGCCGCC
GTGGCGGGGC GGGATGCGGT GCTGTCGGCG CTCGGAGTGC CCGCCGGGAA GGGACCGATC
AGCACCTATT CGCGCGGTGT GGCCAATATT GTCGCCGCGA TGGAACAGCA TCGGGTGCGT
CGCCTCGCGG TGGTCAGCTC AAGCGGGGTC GCCCCGCGCC CGTACTCCGA TGGCGGGTTC
CTGTTCAACC GAGTACTACT GCCATGTGTG ACGCGGGTGC TGGGCAAGAC GCTGTACGAC
GACATGCGGC GGATGGAAAC GCTGGTCCGC GCCAGCGGTC TGGACTGGAC GATCGTGCGC
CCGAGCGGGC TCTATCACCT GCCGTCGTCC ACCGGCTACA CCCTCGTCGA GGGCCACGCC
GACGGCAGGT TCACCGCCCG CGCGGACCTG GCCGCGAGCA TGCTGGCTCT GCTGGACGAC
GACCGCTACC TCCGCACCAC CGTCAGCGTC ATCACCACCG TCGACAACCC CACCTTGCTC
CGGTGGATCC GCCGCGAAGC CCTCGCCAAG CGCTGA
 
Protein sequence
MRIAVFGANG PTGRLVTGQA LAAGHQVAAV TRQPDSFPLH HDRLEVVGAD VLDPVAVDAA 
VAGRDAVLSA LGVPAGKGPI STYSRGVANI VAAMEQHRVR RLAVVSSSGV APRPYSDGGF
LFNRVLLPCV TRVLGKTLYD DMRRMETLVR ASGLDWTIVR PSGLYHLPSS TGYTLVEGHA
DGRFTARADL AASMLALLDD DRYLRTTVSV ITTVDNPTLL RWIRREALAK R