Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3802 |
Symbol | |
ID | 8667092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4241638 |
End bp | 4243485 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | lipid A export ATP-binding protein |
Protein accession | YP_003339465 |
Protein GI | 271965269 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.360172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.799293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCCTG ATACCGCCCC CGAGCGAGAT ACCGAGACCG GTCAGTCCCC CACCCCCCGC CCGCGCAGCC TCAGGACGAG CTCGCTGTGG CGGATGAAGT CCTACCTCCG TCCCTACACC ACCCGCCTGC TGCTCATCTG GCTACCGGCC TTCGGCGGGA TCGCCATCGG CATCGTCATC CCGCTGATCG GCAAGGAGAT CATCGACGGC CCCGTCGCCC GCGGCGACGC CGGAGCCCTC CTCCCCCTCG CACTGCTCGC CCTGGCCCTG GGCGTGATCG AGGCGCTGCT CATCTTCCTG CGAAGGTGGT TCCTGGCCGA TGCCGTCATC GGCCTGGAGA CGACGATCCG CGACGACCTC TACCGGCACC TGCAGCGGCT GCCGATGAGC TTCCACGGCG CCTGGCAGTC CGGCCAGCTG CTCTCCCGCG CGACGACCGA CCTGTCGGTC ATCCGGCGCT TCCTCGGCTT CGGCATGCTC TTCCTCGTCC TGATCATCTT CCAGATCGTG ACGGTGACGG GGCTGCTGCT GCAGATGTAC TGGCCGCTCG GCCTGCTGGT CGCCGCGGCG GCGATCCCGG TCGTGGTCAC CTCGCTGCGC TTCGAGCGGG GCTACATCAC CGTCTCCCGC CAGGTCCAGG ACGAGCAGGG CGACCTCGCC ACCGTGGTCG AGGAGTCCGC GGTCGGCATC CGCACGATCA AGGCCTTCGG CCGCGGCCGC CACGTCTACG ACACCTTCGA CGACGGGGCC CGCAAGGTCT ACCGGACCTC GATGGAGAAG GTACGGCTGT CGGCCAGGTT CTTCACCTTC CTGGAGGTGA TCCCGAACGT CACCCTCGCC GTCGTGCTGC TGCTGGGCGC CCTCGCGGTC GGCTCGGGCT CGCTGACGCT GGGCACCCTG GTGGCCTTCA CCACGCTGAT GCTGCAGCTC GTGTGGCCCG TCTCGGCTCT CGGCTTCATC CTGGTCATGG CCCAGGAGGC GATGACCTCG GCCGACCGGG TGATGGAGGT GCTCGACACC GACCCGGAGA TCGCCGGCGG CCTGGACGTG GTCGAGCGCC CCCGCGGCCA CCTGCGCTAC GAGGGCGTGG AGTTCCGCTT CCCCGGGGCC GCCGAGCCGG TGCTCCGCGA CGTCTGGCTG GACGTGCGGC CGGGAGAGAC GGTCGCGGTC GTGGGCGCGA CGGGTTCGGG AAAGACCACC CTGACCTCCC TCGTCCCCCG GCTGTACGAC GTCAGCGCGG GCCGGGTCAC GATCGACGGG CACGACGTGC GGGACCTGTC GCTGCCCGTC CTGCGCTCGA TGGTCGCCAC GGCCTTCGAG GAGCCGACCC TGTTCTCCAT GAGCGTCAGG GAGAACCTCA CGCTGGGGCG GCACGACGCC ACCGACGAGG AGATCGAGGA GGCGCTGCGG GTCGCCCAGG CCGGGTTCGT CCACCAGCTG CCGTGGGGGC TGGAGACCAG GATCGGCGAG CAGGGCATGT CCCTGTCCGG CGGCCAGCGC CAGCGCCTCG CCCTGGCCCG TGCGGTCCTC AGCCGGCCGA GGGTCCTCGT GCTGGACGAC ACCCTGTCGG CCCTGGACGT CGAGACCGAG GCCCTGGTGG AGGAGGCCCT GCGGCATGTC CTGCGGGACG CCACCGGGAT CGTGGTGGCG CACCGCGCCT CCACCGTGCT GCTCGCCGAC AAGGTGGCCC TGCTGCTGAA CGGCACGATC GCGCACGTCG GCCGCCACCA GGAGCTGATG GCGGGCGTGC CGGAGTACCG GGCGCTGCTG TCGGCGGAAC TGGACGGCGA CCCCGACGGG CTGGACGGGC TGGACGGCGA CCTGGACAGC GAGGGGGCCC TCCGATGA
|
Protein sequence | MPPDTAPERD TETGQSPTPR PRSLRTSSLW RMKSYLRPYT TRLLLIWLPA FGGIAIGIVI PLIGKEIIDG PVARGDAGAL LPLALLALAL GVIEALLIFL RRWFLADAVI GLETTIRDDL YRHLQRLPMS FHGAWQSGQL LSRATTDLSV IRRFLGFGML FLVLIIFQIV TVTGLLLQMY WPLGLLVAAA AIPVVVTSLR FERGYITVSR QVQDEQGDLA TVVEESAVGI RTIKAFGRGR HVYDTFDDGA RKVYRTSMEK VRLSARFFTF LEVIPNVTLA VVLLLGALAV GSGSLTLGTL VAFTTLMLQL VWPVSALGFI LVMAQEAMTS ADRVMEVLDT DPEIAGGLDV VERPRGHLRY EGVEFRFPGA AEPVLRDVWL DVRPGETVAV VGATGSGKTT LTSLVPRLYD VSAGRVTIDG HDVRDLSLPV LRSMVATAFE EPTLFSMSVR ENLTLGRHDA TDEEIEEALR VAQAGFVHQL PWGLETRIGE QGMSLSGGQR QRLALARAVL SRPRVLVLDD TLSALDVETE ALVEEALRHV LRDATGIVVA HRASTVLLAD KVALLLNGTI AHVGRHQELM AGVPEYRALL SAELDGDPDG LDGLDGDLDS EGALR
|
| |