Gene Sros_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3390 
Symbol 
ID8666678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3726570 
End bp3727598 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMembrane protein related to metalloendopeptidase- like protein 
Protein accessionYP_003339070 
Protein GI271964874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.770035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCG ACGGAGTGCT CACGGCGGGA TTAGTCCTGC TGCTCGGCCT GGGATCGGGG 
GCGGCGACGT CCGCCGCCGC CGCGACCCTA CCGGCCGCCC CCACGCCGAC CCCGACGGCC
ACGCAGTCGA GCCCGACTCC CACGCCGACC GCCGGAGCCG AGAACAACGA CCCGCCGAAC
GAGGCCGCGG TGGCCGAGCA GTCGGTGAGG GTCATGGCCT CCACCAACTT CCAGCTCCCC
TTCCCCTGCG GCCAGTCCTG GGCCGGCAAC AGCAGCGCAA GCAGCGCCCA CAGGGCCTAC
GAGATCGACT TCAACCGGGG CAGCTCCGCG GACGCCGATC TGGGAGACAC CGTCGTCGCG
GCTGCGGCGG GCACGGTGGT CATCTCCTCC CACCAGGGAT CGACCAACGG ATACGGGAAC
CTGGTCAAGA TCGACCACGG CGGCGGCTGG ACGACCTTCT ACGCGCACCT GAACTCGCGA
TCGGTGAGCG CGGGGGCCAA GGTCTCCCAG GGCCAGAAGA TCGGCACGGT CGGCAAGACC
AGCAAGCCGG GCAACAACGT CTCGGCCCAC CTGCACTACG AGGTACGTCA GGGCGAGGGC
TACCCCGGCA ACATCCGCAA GGCCGTCTTC AACGGGACCA CGTTCGGCTA CCCGATCCAG
ACCCTCACCT CGAAGAACAA GTGCGGCGGT GGAGGCGGCA CGAACCCGCA CACCGCGCAG
TCGGTCTGCG GCAGCGGCTA CACCGTCATC GACTCCGCCG CCCTGGGCAC CGCCGGCACC
GCCTACCTGC TCTACAACAA CGCCAACGGC AACAACTGCG TCGCCACCAT CAAGAAATCC
TCCCTGGGCA CGGCGACCGC CACCACCGCC TACCTGGAAG TGCAGGGCAA AACCCGCATC
ACCGACAGCG GCAGCTTCAC CTACTACGCC GGCCCGGTCC GCGCCGCCGC CGCCGGCAAA
TGCGTCAAAT GGGGCGGCAA GGCCGGCTCG TCCACCTACA ACAGCCCCTT CGAACACTGC
GGCAGCTGA
 
Protein sequence
MRLDGVLTAG LVLLLGLGSG AATSAAAATL PAAPTPTPTA TQSSPTPTPT AGAENNDPPN 
EAAVAEQSVR VMASTNFQLP FPCGQSWAGN SSASSAHRAY EIDFNRGSSA DADLGDTVVA
AAAGTVVISS HQGSTNGYGN LVKIDHGGGW TTFYAHLNSR SVSAGAKVSQ GQKIGTVGKT
SKPGNNVSAH LHYEVRQGEG YPGNIRKAVF NGTTFGYPIQ TLTSKNKCGG GGGTNPHTAQ
SVCGSGYTVI DSAALGTAGT AYLLYNNANG NNCVATIKKS SLGTATATTA YLEVQGKTRI
TDSGSFTYYA GPVRAAAAGK CVKWGGKAGS STYNSPFEHC GS