Gene Sros_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3143 
Symbol 
ID8666431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3421778 
End bp3422923 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID 
Productaminotransferase 
Protein accessionYP_003338832 
Protein GI271964636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.29788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACC TCTCGATCCC CCCTCTTGCG GAGCTGAGGA AGCGCCGGAG CGCGAAATGG 
CGTACCTTCC CGGACGACGT CCTGCCCCTT CCGGTCGCGG AGATGGACTT CCCGCTGGCG
GAGCCGGTCG CCAGGGCCCT TCACGAGGCG GTTGACCGGT CGGACACCGG CTACGCGGCA
CCGACCCGTG ACCTCGCGGA CGCGGTCAGC GCCTACGCCC GGCGCGCCTG GGACTGGAGG
ATCGACGCCG ACGATGTGCG CACCGTCGCC GACGTCGGAA TCGGCATCGT CGAGACGCTG
CGCCGCGTCG TCGGCGCCGG AGACCGCGTG GTGATCAGCC CGCCGGTGTA CGAGCCGTTC
TCCTGGTGGG TACGCGAGGT CGGGGCCCAT GTCGTCGAGG CGCCGCTGGC CGGGGGACCG
CTGGGATGGC GGCTCGACCT GGACGCCCTG GAACGCGCCT TCGCCGGCCA TGCCACCGCG
TATGTGCTGT GCAACCCGCA CAATCCCGTC GGCCTTGTGC ACCGGCGCGA GGACCTGGTC
GCGCTCGCCG AGCTGGCCGA CAGGTACGGC GTCTACGTGC TGTCCGACGA GATCCACGCC
CCGCTCGTCC TGCCGGGGGC CGAGTTCGTC CCCTTCCTGT CGGTATCGGA TGAGGCGAGG
CGCTGGGGGT TCTCGTTCCT GTCCGCCAGC AAGGGCTGGA ACCTGGCCGG GCTCAAGGCG
GCCACCGTCA TCACCGCAGG CCCGGTGCCG AAACGGCACG TCGACCGCCT GTCGCCGCAC
TCGCTCTACC GCACCGGGCA CCTCGGAGTG CTCGCCACGG TGGCCGCGTT CAACCACGGT
GATCAATGGC TCGCCGAGGT CCTGGACGTC CTCGACCGCA ACCGGAGACT GCTGGACGAG
CTGCTGGCGA AACTGCTCCC CGGCGTCCAC TACGGGCAAC CGCAGGCGGG CTTTCTGGCC
TGGATCGACT TCCGCGCCCT CGGCTGGGGC GGCGACCCCG CCGAACACAT CCTCGCCGCC
GCCAGGGTCG CTCTGAACGC CGGACACCGC TACGGCGATG CGGGCATCGG ATTCGCGAGG
CTGAACTTCG GCTGCTCGCC GCAGACGCTC ACCGAAGCCG TCACCCGTAT CGCCGCCGCC
CGCTGA
 
Protein sequence
MGNLSIPPLA ELRKRRSAKW RTFPDDVLPL PVAEMDFPLA EPVARALHEA VDRSDTGYAA 
PTRDLADAVS AYARRAWDWR IDADDVRTVA DVGIGIVETL RRVVGAGDRV VISPPVYEPF
SWWVREVGAH VVEAPLAGGP LGWRLDLDAL ERAFAGHATA YVLCNPHNPV GLVHRREDLV
ALAELADRYG VYVLSDEIHA PLVLPGAEFV PFLSVSDEAR RWGFSFLSAS KGWNLAGLKA
ATVITAGPVP KRHVDRLSPH SLYRTGHLGV LATVAAFNHG DQWLAEVLDV LDRNRRLLDE
LLAKLLPGVH YGQPQAGFLA WIDFRALGWG GDPAEHILAA ARVALNAGHR YGDAGIGFAR
LNFGCSPQTL TEAVTRIAAA R