Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3993 |
Symbol | |
ID | 5081476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4645185 |
End bp | 4645718 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640501205 |
Product | hypothetical protein |
Protein accession | YP_001185495 |
Protein GI | 146295071 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACATA CTGTAAGCAC AAAAAACCTA GTTAAAGCGA GCGTATCGGC AACGATAGTG GCAGCCATTG CACTGGTCAC TTTTATTCTC CCAGCCGAAT ACAACATCGA CCCGACAGGC GTAGGCCAAA AATTGGGATT AACGACACTT GCACAAGCCG CTGAAGCCGA AGGTGTGGTT TCAACGCAGG GCTTAGGTGA GAAAAACAGC AACGAATTTC AAACGATTGA AGTGGTTGTT CCCGCTGGTC GAGGCGTCGA ATACAAGTTT GCTATGCCAC AGTATGCCAA AATGACCTAT GAATGGTTAA CTGATGGCGA CGCTTTGTAT TTTGACCTCC ATGGTGAACC AGAGGGAGAT ACTACAGGTT ATTTTGAGAG TTACACCATA GCAACATCAA ACGAAATGAA AGGGAGCTTT ACGGCACCTT TCGCGGGTTC CCATGGTTGG TATTGGAAAA ATAAATCGGA TAAACCGATA ACCGTACAGC TACTGGTTAA AGGGCAGTAT GACGTCATTG GTCTTAAACA ATAA
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Protein sequence | MQHTVSTKNL VKASVSATIV AAIALVTFIL PAEYNIDPTG VGQKLGLTTL AQAAEAEGVV STQGLGEKNS NEFQTIEVVV PAGRGVEYKF AMPQYAKMTY EWLTDGDALY FDLHGEPEGD TTGYFESYTI ATSNEMKGSF TAPFAGSHGW YWKNKSDKPI TVQLLVKGQY DVIGLKQ
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