Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3513 |
Symbol | |
ID | 5078706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4087970 |
End bp | 4088638 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500716 |
Product | transposase |
Protein accession | YP_001185021 |
Protein GI | 146294597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC GTCATCCACT CAATACCAAC CTTACCGTCA TCAGCAATGG TCAATACAAA GGCTTCAAAG TTTATCCTAG GCCACTAAGC GCTGAATACT TAGATGCAAT TTTACAGACC TTACAAGCAG CTATGAATGA GCACCCTCGT ACCTTAATGG TGCGGTTTGA TTTGCATCTA CCACAGCTTA ACTTTCGCGA CTCACCAACG GTTTATGATT CAACGGTAAT CAGCAAGTTC TTTAAATCTC TGGATGCCAA AATCCAGCAT GATAGGTTAA TCAAGGGCCG TGAGGGTAAG CGGGTGCATC CTTCCACACA GCGTATTATT TGGGCAAAGG AGCGAGCATG TGCCGATACA GACCATTACC ATATCGCTAT CTTCCTCAAT AACGATGCTT ATAACCATCT CGGTAATTAC AATCGAAGCG GACAAAACCT GAGTACTAAG ATTGTTGAAG CTTGGGCCAG TGCCTTGGGA TTAGATGATT ACAGTACTCG GCATTTAGTG CATTTCCCTG AGGATACGCC AGTTTACTAT CTCAATCGTA ACGCACTGAA TTATCCTCAA ACCTTTGCGA ATGCTTTCTT TCGCTTGAGC TATCTAGCCA AGCTAGAGAC TAAGCATTAT GGCGATAGAA CACGTTCATT CGGTTGTAGC CGTATTTAG
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Protein sequence | MSKRHPLNTN LTVISNGQYK GFKVYPRPLS AEYLDAILQT LQAAMNEHPR TLMVRFDLHL PQLNFRDSPT VYDSTVISKF FKSLDAKIQH DRLIKGREGK RVHPSTQRII WAKERACADT DHYHIAIFLN NDAYNHLGNY NRSGQNLSTK IVEAWASALG LDDYSTRHLV HFPEDTPVYY LNRNALNYPQ TFANAFFRLS YLAKLETKHY GDRTRSFGCS RI
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