| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2825 |
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| Symbol | |
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| ID | 5080798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3282395 |
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| End bp | 3283159 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640500019 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001184343 |
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| Protein GI | 146293919 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000784183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGATA CCCATGCTCA TTTGGACTTT GCCGAATTTG ATGCGGATCG CAGTGAAGTT
GTGCTAAAAA TGCATCAAGC TGGGATAAAA AACCTGATTA TTCCTGGCGT TTCCCCTTCT
CATTGGCAAA AACAACTTAC CGTTGCAGAG CAATATCAAG CCTACTTTGC ACTGGGTATT
CACCCTTGGT TCTGTCCGCA GGATATCGAT GCATCACTTC AAGCATTAGC ATCTGAGGTA
TCAAGATGGA TTGGGTGTTA TCGATTTGTA GCTATTGGTG AGTGTGGTTT AGATAAACTT
TATTCTGTGA CTTGGCCGCA ACAACTGGCT TTTTTTGAAG CTCAATTACG GTTAGCAAAA
GCCGTTAATC TGCCTGTTAT TGTCCATAGT GTTAAAGCCC ATTCAGAGAC TTTAGATTGC
TTAAAAAGAT ATCAATTACC TCGAGGTGGC GTAATACACG CTTTTTCTGG TAGTCCTGAA
ATCGCCCTCG AGTATATTAA ATTAGGTTAC AAGTTAGGAA TTGGTGGTTT AATTATGAAC
CCCAATGCTA AAAAATTACT CAAAACGGTA TGTGAACTCC CTCTCGAAAA TTTCCTGCTT
GAGACCGATT CGCCCTCAAT GGCGCCAATA AATGTTACTG AAAAACGTAA TCAACCGGCG
AATGCCGCTC TTTTTATAGA CAAAATTGCC AATTTGCAAA AAAAATCAAG TGTTCTAATA
TCAGAACACT TGATGTTGAA TGCTATGCAA CTGTTTGACC TTTAG
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| Protein sequence | MLDTHAHLDF AEFDADRSEV VLKMHQAGIK NLIIPGVSPS HWQKQLTVAE QYQAYFALGI
HPWFCPQDID ASLQALASEV SRWIGCYRFV AIGECGLDKL YSVTWPQQLA FFEAQLRLAK
AVNLPVIVHS VKAHSETLDC LKRYQLPRGG VIHAFSGSPE IALEYIKLGY KLGIGGLIMN
PNAKKLLKTV CELPLENFLL ETDSPSMAPI NVTEKRNQPA NAALFIDKIA NLQKKSSVLI
SEHLMLNAMQ LFDL
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