Gene Sputcn32_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1245 
Symbol 
ID5081557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1391151 
End bp1391627 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content43% 
IMG OID640498377 
ProductMarR family transcriptional regulator 
Protein accessionYP_001182772 
Protein GI146292348 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT ACGAACAACT ATTGATTTCA CTGCGCCGGG TGATCCGCGC TATCGATATT 
CATTCTCGCC AATTGAACAA ACATTCAGGT TTAACTGGGC CACAATTGAT GGTGATGCAA
AAAATTGCTC AACTAGATGC TCCCCTTGCA AAACAAGTTG CTGAAGAAAT TACGCTAAGT
CCTGCGACAG TGACCACCAT TATTGATCGT CTCGAGGGGC GTGGTTTAGT GATACGCAAA
CGGAGTGATA CAGATAAACG TAAAGTGCAT TTATCTTTAA GTGATGCTGG GCGGAGCTTA
TTACAAGATT CACCGAAACC GTTACAAGAT CACTTTATCA AGCGTTATCA AAATCTTGAA
GAATGGGAGC AAAGCCAATT GCTTTCGGCG GTTGAGCGTA TAGCGGTGAT GATGGATGCC
GATAAAATTG ATGCCGCACC TATGCTTTTA GTGGGAAAAA TCCAAGGGGA TGAGTGA
 
Protein sequence
MEKYEQLLIS LRRVIRAIDI HSRQLNKHSG LTGPQLMVMQ KIAQLDAPLA KQVAEEITLS 
PATVTTIIDR LEGRGLVIRK RSDTDKRKVH LSLSDAGRSL LQDSPKPLQD HFIKRYQNLE
EWEQSQLLSA VERIAVMMDA DKIDAAPMLL VGKIQGDE