Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0235 |
Symbol | |
ID | 5079161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 253541 |
End bp | 254446 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497355 |
Product | hypothetical protein |
Protein accession | YP_001181770 |
Protein GI | 146291346 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTAA TCCCCTTCGG CCTTCGTAGT GATGGCGTGT ATATAGATGC AGAGGACGCA ACGCGGGGTA AATCCTGTGA TTGTACTTGC CCATCATGCG GTATTGCCTT AATCGCACGG CAGGGTGACG TTAATGCGTC CCACTTTGCC CATGACTCCA AAGGTGCGAG TAAGGAAGAT ATAGAAGCTT GCAAATACTC GTTTTATGTC TCAGTACGCT ACATGCTGAA GCAGCTGCTA CAGGGAACAG GCTTGTTAAT GATGCCACCT CTCGAGATTG ACCATCACGG CCAAACGCAC GTCATTACCA AAAGTTTGCC AATCACGGTG GAGCCCATGG ACATAACGCC TGATAGTTAT GAGCAGGATA TTATGTTTGA CTTAATCTTT ACGGTCTCAG GTCGCAAGCT ATGCCTATAC ATTAGCCATC CTGGTCGCCC AGCGCCGATA TATAACAACC TATCAAGAGA TCAGCACACG GCGGTACTAG GGCTTGATTT GATTCCTTTC TCAAAGATAT TTAATGAGTT TTACAAACTA AAATCAGCTC AAACACTACT GCGCGAATGG CTTGAAACGT CCATTAAGGG CAAGCATTGG ATTTACAATC CCAGGCGCAA TGCGTGGTTT GAGCATCAAC AGGCTAAGGC TCCAGCTGTT CAGGAGCAGC AACAGCAACA AGTTCTGGAA CAAACCAAGA CCACCCGTGA TCGGATTAAA GAGCAGATTG CCCAAATGGA CAGGTTGAAC GTAGTCGCTA TATATCGCTG CGTTTTTTGT CAGTTGGACT TTGAAGGCAG TGCGTTACTC AACTACTGCC CCAAGTGTAA TGACCATCTA AGTGTGAAAA GAAAATCGGA GATTGCGGCT CAAACTCCAC CTAAAGGCAA GTATCGGTAT CGATGA
|
Protein sequence | MNLIPFGLRS DGVYIDAEDA TRGKSCDCTC PSCGIALIAR QGDVNASHFA HDSKGASKED IEACKYSFYV SVRYMLKQLL QGTGLLMMPP LEIDHHGQTH VITKSLPITV EPMDITPDSY EQDIMFDLIF TVSGRKLCLY ISHPGRPAPI YNNLSRDQHT AVLGLDLIPF SKIFNEFYKL KSAQTLLREW LETSIKGKHW IYNPRRNAWF EHQQAKAPAV QEQQQQQVLE QTKTTRDRIK EQIAQMDRLN VVAIYRCVFC QLDFEGSALL NYCPKCNDHL SVKRKSEIAA QTPPKGKYRY R
|
| |