Gene Spro_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4076 
Symbol 
ID5607033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4518986 
End bp4520170 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content38% 
IMG OID640939637 
Productputative glycosyl transferase 
Protein accessionYP_001480299 
Protein GI157372310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.303015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC CCATAAGAAA AGTGGAGGAT GTTGTGAGCA AGGATTTGGA AATTTCTATT 
TCAAGTGGTC GTTTCAAAAA ACTAAGGGAG TGGAACAGGA GACGAAATTA CTACTTCAAG
GAAGTAAAGC TTAATATCAA AATTTACATT GCAAAGCTTA TCTGGGATAA GCGTAGAAAA
AGCAATTTTG ATATCAAAGC AATCAAAACT GTACTGCTCC TTCGCAATGA AGGAACAATC
GGAGATGTTG TGGTTTCAAC GCCACTAGTG AAGTGCCTTT ATGAGTCGGG TTATACAGTT
GATTTACTAC TTACAAAGGC AAGTAGCGTA GCTATGAAAT ACAACCCCTA TGTCAGGAAT
GTCTACGAAG CTGGGGACTG TAACAATGAG GTTTTCTTGA AGAGATTTAG TCACACCGTG
GCCGAGTCGA CAATGAGAAC GTTGAATGAA AATAATTATG ACCTGGTGGT TGACCTTTGT
TTGTTCGATA CCCCTGTGCA TAGGATGATG CTTTTTCGGG ACATAAACGC AAATTTTGTT
CTTGGGTTTA ATAAATGGGA TTGCATTAAT CACTACAGCA AATCCATTTC ATTTAAGAAT
GGTAAGGAAC ATGTGACAAA AGCCATTTCT TTGGTGGCGC ATAGCATGGA TCTTAATTTT
GAGAATCGTC ACGCCTATGA CCTACACATC CCTGACGCGA TTGCTTTCGA AGTGCGACAG
TATTTAAGTG CATGGGAAGG TAAAGTTAAA GTTGTTATTA ATATTTTCAC TGGAAGCCCA
GAGAGAAATT TATCTCAAGA GCAATTAACT CAAACTATTG AGCTGCTTAA CGAAAAGTCA
AGTAACATAA TTGTTATAAT TCTTGATCAC AAGAAAGAAC TGGACGTGCA TCTTCCCGAT
AATGTTGTGA TAAATCCATT TAATTCACTG CATCACGTCA TGGAGCTGAT TAGAAATGTT
GACCTGATTA TATCTCCAGA CACTTCGATT GTACACATCT CTGCTACATG GAAGAAACCA
TTAATCTCTG TTTATAAGAA TATAACTGAC AATAATGATT TGTGGGCGCC GGGTCATAAA
GAGGCAAGTC AGATTATTAT TAACAAGAGA AAGATATCTG ATGTGGAAAA TGTTCCTGAA
CTTATAATTG GCGAGGCAAA AAAAAGAGGG GTATTTGAAA GTTGA
 
Protein sequence
MNDPIRKVED VVSKDLEISI SSGRFKKLRE WNRRRNYYFK EVKLNIKIYI AKLIWDKRRK 
SNFDIKAIKT VLLLRNEGTI GDVVVSTPLV KCLYESGYTV DLLLTKASSV AMKYNPYVRN
VYEAGDCNNE VFLKRFSHTV AESTMRTLNE NNYDLVVDLC LFDTPVHRMM LFRDINANFV
LGFNKWDCIN HYSKSISFKN GKEHVTKAIS LVAHSMDLNF ENRHAYDLHI PDAIAFEVRQ
YLSAWEGKVK VVINIFTGSP ERNLSQEQLT QTIELLNEKS SNIIVIILDH KKELDVHLPD
NVVINPFNSL HHVMELIRNV DLIISPDTSI VHISATWKKP LISVYKNITD NNDLWAPGHK
EASQIIINKR KISDVENVPE LIIGEAKKRG VFES