| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3566 |
|---|
| Symbol | |
|---|
| ID | 5605498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 3943417 |
|---|
| End bp | 3944889 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640939117 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001479790 |
|---|
| Protein GI | 157371801 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTTT CCAGCAACAG CCTGCTGCCG ACGGCAGTTG CGCAACCGGG TTACTCACGC
GAAAGGATTA AACCGCGCAT CGTGCATCTG GGTTTTGGCG CGTTTTTCCG CGCACATCAG
GCGGTATATA CCGAACAGTT GGCTAACGAG CACGCCAGCG ACTGGGGTTA CTGCGTAATC
AGCATGCACA ACGGCCGGCA AAAAATCGCC GACCTGCAGC AACAGAATTT GTTGTATACG
GTCGCCGAAA TGGACAATGA CGGCTGGCAC GGCCAGGTGA TCGGCGTTGT CAGGCAGGCG
TTACACCTGC AGGTTGACGG ACTGGAAGCC GTGCTCGAGG CCATGGCACA GCCGGAGGTT
GCCATCGTTT CACTGACCAT CAGTGAGAAA GGCTACTGTT ACCAGCCTGC CAGCGGCCAG
TTACTGGCGG AACATCCTGA TATCCAGCAT GACATCGCCC ACCCGCTGCA CCCGCAATCT
GCTCCCGGCC TGATCCTGGC CGCACTGCGG CGACGGCGGG AACGAGGGCT GCCGGCGTTT
GCCGTGATGT CCTGCGACAA CATGCCGGCC AACGGTCAGG TGACCCGCAA CGTGCTCAGC
CAGTTGGCTC AGCGGCAGGA TGCGGAACTG GCCACCTGGG TCGAACAACA GGTCGCGTTT
CCATCAACCA TGGTTGACCG CATTGTCCCG GCTGTCACGG CGGAAACACG GCAACACATC
GAGGCTTTAC TCGGTGGCAT CGCCGATCCG GTTGCCGTCG CCTGTGAGCC CTTCTGCCAA
TGGGTGATCG AAGATATCTT TCCGCAGGGA CGTCCGGCAT GGGAAAAGAC CGGTGCCGAA
CTGGTCAGCG ACGTGCTGCC CTACGAAGAA ATGAAGCTGC GGATGCTCAA CGGCAGCCAT
TCGTTTCTCG CTTATCTGGG CTATTTGGCC GGTTATGCGC ATATCAGCGA CTGCATGCAG
GACGAAGGTT TCGTTAATGC CGCACGGCAC CTGATGCTGG CAGAGCAGGC ACCGACGCTG
CAGGTCCACG ACCTGGATTT GACGCAATAC GCAGACTCAC TCCTGGCCCG TTACCGCAAT
GCCGCGCTAA AGCACCGAAC CTGGCAGATC GCCATGGACG GCACGCAGAA ACTGCCGCAG
CGCATGCTGG ACACCATACG CTGGCATCTG GCGCACGGCA GCGATTTCAG CTGTCTGGCT
TTAGGCGTCG CCGGTTGGAT GCGTTACGTT GGTGGCAAGG ATGAACAGGG CCGGACGATT
GAGATCAGCG ATCCCTTAAG TGAACGCCTC GCCGATTTGG TCGGCAACAG CCGTGAAGGC
CCGCAGCGGG TGCTGGCGCT GCTGCAGCTT GATACGGTGT TTGGCCACGA TCTTCCTGAT
AACCCACGAT TCGTCAGTGC CGTAACTGAT GCCTATCTGG CGCTGCTGGC GCAGGGTGCC
AAAGAGAGTG TGGCCAGATT ACTGCCAGTT TGA
|
|---|
| Protein sequence | MTLSSNSLLP TAVAQPGYSR ERIKPRIVHL GFGAFFRAHQ AVYTEQLANE HASDWGYCVI
SMHNGRQKIA DLQQQNLLYT VAEMDNDGWH GQVIGVVRQA LHLQVDGLEA VLEAMAQPEV
AIVSLTISEK GYCYQPASGQ LLAEHPDIQH DIAHPLHPQS APGLILAALR RRRERGLPAF
AVMSCDNMPA NGQVTRNVLS QLAQRQDAEL ATWVEQQVAF PSTMVDRIVP AVTAETRQHI
EALLGGIADP VAVACEPFCQ WVIEDIFPQG RPAWEKTGAE LVSDVLPYEE MKLRMLNGSH
SFLAYLGYLA GYAHISDCMQ DEGFVNAARH LMLAEQAPTL QVHDLDLTQY ADSLLARYRN
AALKHRTWQI AMDGTQKLPQ RMLDTIRWHL AHGSDFSCLA LGVAGWMRYV GGKDEQGRTI
EISDPLSERL ADLVGNSREG PQRVLALLQL DTVFGHDLPD NPRFVSAVTD AYLALLAQGA
KESVARLLPV
|
|---|
| |