Gene Spro_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3219 
Symbol 
ID5606242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3546687 
End bp3547682 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content57% 
IMG OID640938762 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001479445 
Protein GI157371456 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAAG AATTATCCCT GCAGAATGCG CAACCCTGGC GCCATCAGCT GTTTGAGTTT 
CTCTACAAGT GGGGGATGTT ACTCACCGTT GTTGCGCTGA TAGCCCTGTT CGGGCTGGCA
TCGGACAACT TTCTCGATCC CAACAACATC ATCAATATCT TACGCTCGAT CGCCATCGTC
ACGGTGATCG CCATCGGAGT CTCCATCTCA CTGTCGGTCG GCGGATTTGA CCTTTCCGTC
GGTTCTACCG CGTCACTGGC CAACGCCCTG GTGGTTTCGC TGTTCGTCTG GTACGGCTTC
GGCACTACCG GCGCGATTGT GCTGACGTTG CTGATTTGCA CGCTGGTCGG TTTGTTCAAC
GCTTTCCTGA TCGTGGTGCT GAAAATTCCC GATATGCTGG CAACCCTGGC CAGCCTGTTT
GTGATCCAGG GCGTGGCGAT GACCTACAGC TACGGCGGAT CCATCACCCA AAATATGCTG
CTGCCGAACG GTGACATGGC AGAAGGCCTG ATCCCGGAGA TTTTCTCGTC TTTGGGCCAG
GTGCCGGTGA TCGTGCTGAT TATGCTGGCG GTCACCGTTG TGGTGCAGCT GTTTCTGTCG
CTGACCAAGC ATGGCCGCCG CATGTACGCC ATCGGCGGTA ATCCGGAAGC GGCACGCCTG
TCGGGCATTC GCACTGTACG TTACAGGGTT GCTGCCTATG TCATTTCTGC CCTGCTGGCC
TCGCTTGGCG GCATACTGCT GGCGTCACGT ATTGGTTCGT CGCAGGTCAA TGCAGGTGGC
GGTTATCTGA TGGATGCGGT CGCCGCCGCC TACATTGGTT TTTCGCTGGC CGGCTCCGGC
AAACCGAACG CGCTCGGCAC GCTGGTCGGT GCGGTGATCC TCGGCGTACT GCAAAACGGC
CTGGTAATGC TCTCCGTCCC CTACTACGCG ATGGACATTA TCAAAGGCCT GGTGCTGGCC
CTGGCGTTGG CAATTACCTA CATCCAGAAA CGCTGA
 
Protein sequence
MSKELSLQNA QPWRHQLFEF LYKWGMLLTV VALIALFGLA SDNFLDPNNI INILRSIAIV 
TVIAIGVSIS LSVGGFDLSV GSTASLANAL VVSLFVWYGF GTTGAIVLTL LICTLVGLFN
AFLIVVLKIP DMLATLASLF VIQGVAMTYS YGGSITQNML LPNGDMAEGL IPEIFSSLGQ
VPVIVLIMLA VTVVVQLFLS LTKHGRRMYA IGGNPEAARL SGIRTVRYRV AAYVISALLA
SLGGILLASR IGSSQVNAGG GYLMDAVAAA YIGFSLAGSG KPNALGTLVG AVILGVLQNG
LVMLSVPYYA MDIIKGLVLA LALAITYIQK R