Gene Spro_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_2877 
Symbol 
ID5603278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3157432 
End bp3157947 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content51% 
IMG OID640938418 
Productfimbrial protein 
Protein accessionYP_001479106 
Protein GI157371117 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA TTATGCGCCA CCCGGCGTTA TGGATATTGT GCAGTGGTTT AGGCGCCAAC 
GGTTTGGCTC AGGCCGACGC GGTAACGCTC AATATCACCG GTAATGTAAT TGCCGCCCCT
TGTGTCATTG ATGGTGCCAG CTCTCTGGAT ATTAAACTGG ACGATATCGT GGTCAGCAAA
TTGCAAAAAG CCGGTGATAC CAGCCCGTTT AAAAGCTTTG AGTTAAAGCT GAAGGACTGT
CCGGCTGCGA CCACCAAGGT CACGGCCAGC TACACTGGCA CAGTATCCCC TCACTATAGC
GACAGTTTTA TCAATACCGG CACCGCAGGG CAGTTGGCGC TGTATGTTCA GGATGATGCA
AGCAAGACAA TTACCCCCAA CACCACCCGC CAGGTAGACG TGAACAGCAC TTCCAAAACA
GCGGTGTTTA GCCAGAAGGT GCAGATTTAT TCGAAAGGCT CTGCCACCGC CGGCACGGTA
ATTGGCAATA TCGTGGTGTC CTTTACCTAT CAATAA
 
Protein sequence
MLRIMRHPAL WILCSGLGAN GLAQADAVTL NITGNVIAAP CVIDGASSLD IKLDDIVVSK 
LQKAGDTSPF KSFELKLKDC PAATTKVTAS YTGTVSPHYS DSFINTGTAG QLALYVQDDA
SKTITPNTTR QVDVNSTSKT AVFSQKVQIY SKGSATAGTV IGNIVVSFTY Q