Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1500 |
Symbol | |
ID | 5604125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1634050 |
End bp | 1634889 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640937032 |
Product | transcriptional regulator, CadC |
Protein accession | YP_001477732 |
Protein GI | 157369743 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATA GATTAAACGA TCACATCATT TTTGATGTGG ATACGGGCAC CCTGAGCCTA ACGGAGCTCT CTGATGACCC CATCTCTATT TCCAATCCTT CAAAGCGACT ACTGCTGCTA TTGATTACCC ATCATGGTGA GGCAGTTGGC CGGGAAGTGA TATTCAAGAA GGTTTGGGAC GATTATGGCA TGGTTTCTGG TAACAATAAT CTTAACCAGT GCGTGAGCAA GCTACGTCGG GTAATTAAAA ACCTGGGCAT TGAGGAAGAG GTGATCGCCA CCGTACCCAA GGTCGGTTTT ATGCTGCGCT ATGAAATAAT AGTTGAACAC TGTGACGGGC CGGAAAACAG CTTCACCGAC GAAGAAACGT CTGTTATTCC GCATGCCTCT GTTCAACCGG AAATAGCATC ATCGGCCGGG AAGCCGGGGA GCGTCGGGAC AGTGTATGCC GGCTATTCCC GACGTTGGTG GACGATAGCC AGCATCGTCG CACTGGGGGT GATTATGCTG GTGGTGGCGA TTAGCTGCTA CCTCACCGGC TCGGTTTCCC GGCAGGAGAT TTATTTGGGT AAGGCCAACA GCTGTAAGGT TTTCATGTCG ATGCCCGGCG CTGCGGTTGC CGTCAGTGCC GGCCTGAGTC GTGACATTCT GGCCTATGCC GCCCCGCAGA CGGCAGAGTG CAGTGGCGAC GAGTTCTTGT TGGTGGTGCG TAGTAACCAG GTGCGCTCCT ACATTTCCGG TATTTCCCGG CTATTTTTCC TGCGTTGTCG GATTTTGCGT GAGCACAGGG TCGAAATTTG TTCTGGTCTT GAAAGCGACA AAGCAGCAAT TATCAATTAA
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Protein sequence | MKYRLNDHII FDVDTGTLSL TELSDDPISI SNPSKRLLLL LITHHGEAVG REVIFKKVWD DYGMVSGNNN LNQCVSKLRR VIKNLGIEEE VIATVPKVGF MLRYEIIVEH CDGPENSFTD EETSVIPHAS VQPEIASSAG KPGSVGTVYA GYSRRWWTIA SIVALGVIML VVAISCYLTG SVSRQEIYLG KANSCKVFMS MPGAAVAVSA GLSRDILAYA APQTAECSGD EFLLVVRSNQ VRSYISGISR LFFLRCRILR EHRVEICSGL ESDKAAIIN
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