Gene Spro_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1188 
Symbol 
ID5602876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1305690 
End bp1306853 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content61% 
IMG OID640936709 
Productamidohydrolase 
Protein accessionYP_001477420 
Protein GI157369431 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC AACTGGCCGA AAAAATCGTC GCCTACCGCC GTGAACTGCA TCAGAACCCT 
GAGCTGTCCA ACCACGAATT TGCCACTACC GCCCGCCTGA CCCGCTGGCT GGAAGAGGCC
GGTATCCGTA TTCTTCCGCT GGCGCTGAAG ACCGGCGTGG TGGCTGAAAT CGGCAGTGGC
AAGGGGCCTG TCATTGCGCT GCGCGGGGAT ATTGACGCCC TGCCGATAGA AGAAATTTCT
GGCGTGCCGT TCAGTTCGCA AAACAGTGGC GTGATGCACG CCTGCGGACA TGATTTTCAC
ACCTCGGTGA TGCTGGGCGC GGCGCATTTG TTGAAAGCAC GCGAAGCCAC CCTGCCCGGC
ACGGTACGCA TTTTCTTCCA GCCGGCGGAG GAAACCTTCA ACGGCGCCCA GCACCTGATC
GACGCCGGAG CCCTGGATAA CGTGGCGGCG GTATTCGGTC TGCACAACGC GCCGGAGCTG
CCGACCGGTA CCTTTGCCAC CCGCGCCGGG GCGTTTTACG CCAACGTCGA TCGCTTCCAG
ATCCTGATCA CCGGCAAGGG GGCGCACGCC GCCAAACCGG AGCAAGGGGT GGACACCATC
GTCACCGCCA GCCAGATTGT CAACGCGTTG CAAACCCTGC CCAGCCGCAG CTTCAGTTCG
CTGGAGTCGT TGGTGGTGAG CGTCACGCGC ATTGAGGGCG GTAACACCTG GAATGTTCTG
CCACAGACCG TAGAGCTGGA GGGCACGGTC CGGACCCATA GCGATAAGGT TCGTCGCCAG
GTACCGGATA AAATCCGCCA GGTGATTAAC GGCGTCGCCG CATCCCTTGG CGCACAAGCG
GAGCTACGCT GGCAGGCCGG CCCACCGGCG GTAGTCAATG ACGCACGCTG GGCAGCCTTC
AGTAAAACCG TCGCCGCCGA AGCCGGTTAC CGGGTGGAAG AGGCTGAGCT ACAGATGGGC
GGGGAAGACT TTGCACTGTA TCTGCACCAC GTGCCGGGCG TCTTTGTCAG TATTGGCTCG
GCAAGTGAAT TTGGTCTGCA TCACCCGCGC TTCAACCCGG ATGAACAGGC GATTTTCCCG
GCCTCGCAAT ATTTCGAACT GTTGGCTGAG CGCACGCTGC AGCAATTAGT CACCACACCG
GAAAAAGCCA CCAGCAAGGC ATAG
 
Protein sequence
MTSQLAEKIV AYRRELHQNP ELSNHEFATT ARLTRWLEEA GIRILPLALK TGVVAEIGSG 
KGPVIALRGD IDALPIEEIS GVPFSSQNSG VMHACGHDFH TSVMLGAAHL LKAREATLPG
TVRIFFQPAE ETFNGAQHLI DAGALDNVAA VFGLHNAPEL PTGTFATRAG AFYANVDRFQ
ILITGKGAHA AKPEQGVDTI VTASQIVNAL QTLPSRSFSS LESLVVSVTR IEGGNTWNVL
PQTVELEGTV RTHSDKVRRQ VPDKIRQVIN GVAASLGAQA ELRWQAGPPA VVNDARWAAF
SKTVAAEAGY RVEEAELQMG GEDFALYLHH VPGVFVSIGS ASEFGLHHPR FNPDEQAIFP
ASQYFELLAE RTLQQLVTTP EKATSKA