Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0859 |
Symbol | |
ID | 5605416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 954219 |
End bp | 956324 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640936374 |
Product | TP901 family phage tail tape measure protein |
Protein accession | YP_001477093 |
Protein GI | 157369104 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0227343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00167683 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTAGCA GCGGGCAGGA ACTGGAGTCA CAAAACGAGA TAATTAAAGG GCTCGAAGCG ATCGAAAAAC AGACCAGCGC TCTGATGAAG CAGTTGCGTC AACCCCTTGG TAATAAAAGT CTATACAACA TGCTGGGTAA TGATATTCGA CGTGCGGAGA AAAACCTGAA AATCCTGCAT CAGCAGGAAA ATGGCATCGA TTCATTCAGG AAAAATAATC AGGAACTGGT TAAAACCAAT AAATTATTGA CGGCATCGCG GAAAAAATAT TCCGTGCTTG AAACGTTGGC AAAAGGTAGC GCGCCGGGTC AACATTCCCA ACAAATGAAT AACGAAGTTG CGCTGGTGGC GGAAACCATT AGCGCTTTGG AGAAAAAGCA CGGACTGCTC AAAACCATCG ATCGCAACCA GCGCGATAGC CTGACCAGGC AAGGTATTGA TCTTAAGTCA CTCAGCAACG AGCAACGACA GCTTCGCGAC AAAACAATCA ATGCCAATGC CGCTATTGTC TCGATGAAAA ACCAACGGCA GGTGATGACC GGCCAGAGAT TCAGTACCGC ACATGCCGCT AATCAGAATC GCCGTGAAAA CCTCAGCAAA ATAAACAACG CTAGTGCCGC GGGCTTCACC ATCGCAAAAA CGGCCGCCAT CGGCGGAGCC AGGTTGCTGG CTCCAGGTGT TAATTTCGAA AAACAGCTTT CTCAATTACA GGCGCAACTC AAGCTGGATA AATCCGATCC GCAACTTGCC GCACTGAGTC AGCAGGCACG CAGTATGGGC CAATCTGGAA TCTCACCGGA TAAAACAATC CAGGCGCAAA CGGCACTGGC TAAAAAAGGG TTAGGTGCCA ATGAAATCAT GGGGGCATCA CCTGCCGCGC TCAGGCTGTC GAATGCCACA GACAGCGGCG TCAATGAAAC TGTCGAGGCG ATGACCGCGG TGCAGAACGC TTTTAATCTG CCCGCCGACC AGTTCGATCG GATTGCCGAT GTGCTGGCAC TAGCCAGTAG CCAATATGGT ATGACGGTAC AATCCGTCGG TGCAGCCTTG AAAAGCAAAG CAGGCTCAGG GACCGACCTG TTCACTGCGG CGCAAAGAAT TGCCCCCGCA GGCACAGAAA AACTGCAGGC CAACCAGGTT GGCGGTGCCG CGCAGCATTT GGTCACCGTC AAAGGCGACA ATTTGGATGG GGACATCCAA AAGTTGTTTG CCTCCTGGGA CAGCCTGCGG ATCAATTTGT TTTCCGGCCA AAGCGCAGCC CTGCGGGAGC TGACCCAAAC GGCGGCGCAA TGGTTGGTGC AACTGAATTC CTGGGTGACC AGTAACCCCG CATTGGCCAG CACCTTGTTG CAAGTCGCCG GCGGACTCAC GTTATTGCTT GGTGGGCTTA GCGGCGTCAG CCTGGTCGCC ACTCAGGTAC TCCAGGGGTT CACCATCATT AACGGCGCAA TCCTCAAAGC CGGGCAGGCC ATGATTTGGC TGGGGCGCAT GGCAATGGCC AACCCATTGC TGGCCATTGT CGGCTTGATT GCCATTGCGG CTTTTGCGGT GATCGAAAAC TGGGACAAGC TGGCACCATT CTTTAGCAAT CTGTGGGAGA GCATCTCTGC TGGATGCAAA GCAATGGAGA AGTACATTAC GGACACCATT GATAGCTGGA TAAAAAAATT CATGTCGCTG ACTGACTGGC TCCCCGATTG GATGTCATTT GGCAGTAAAA ACAGCGCTAC AGGCCATACC GAAAATCAAG ATGACGACGA TGGCTTTTCG TTCGCCGGCA AGTTCGATTC GGGCGGGAGT ATTCCTGCCG GGCAATTTGG CCTTGTGGGT GAAAACGGCC CGGAACTGAT CGGTGGTCCG GTGCAGGTGA CCAGTCGTCG CCGTACGGCA GCGATGTCGG CAGCATTGCT GTCGCTCAGT GCCCCGGTGA TGGCAGCCTC GCCGGCACCG GTTTCACCCG CAACGCAGAT CCAAATCCCG TCAGTCACTA TCAATATCAC CGCCAGCGCC GGCCAGAGTG AGCAAGATAT CGGTCGTGAA GTCGCGCGGC AATTTGAGTT GCTGACGCGA CGTCAGGCCG CAGATGCTCG CAGCCGAATG AGTTAA
|
Protein sequence | MSSSGQELES QNEIIKGLEA IEKQTSALMK QLRQPLGNKS LYNMLGNDIR RAEKNLKILH QQENGIDSFR KNNQELVKTN KLLTASRKKY SVLETLAKGS APGQHSQQMN NEVALVAETI SALEKKHGLL KTIDRNQRDS LTRQGIDLKS LSNEQRQLRD KTINANAAIV SMKNQRQVMT GQRFSTAHAA NQNRRENLSK INNASAAGFT IAKTAAIGGA RLLAPGVNFE KQLSQLQAQL KLDKSDPQLA ALSQQARSMG QSGISPDKTI QAQTALAKKG LGANEIMGAS PAALRLSNAT DSGVNETVEA MTAVQNAFNL PADQFDRIAD VLALASSQYG MTVQSVGAAL KSKAGSGTDL FTAAQRIAPA GTEKLQANQV GGAAQHLVTV KGDNLDGDIQ KLFASWDSLR INLFSGQSAA LRELTQTAAQ WLVQLNSWVT SNPALASTLL QVAGGLTLLL GGLSGVSLVA TQVLQGFTII NGAILKAGQA MIWLGRMAMA NPLLAIVGLI AIAAFAVIEN WDKLAPFFSN LWESISAGCK AMEKYITDTI DSWIKKFMSL TDWLPDWMSF GSKNSATGHT ENQDDDDGFS FAGKFDSGGS IPAGQFGLVG ENGPELIGGP VQVTSRRRTA AMSAALLSLS APVMAASPAP VSPATQIQIP SVTINITASA GQSEQDIGRE VARQFELLTR RQAADARSRM S
|
| |