Gene Spro_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0039 
Symbol 
ID5607326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp39690 
End bp41006 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID640935524 
Productmajor facilitator transporter 
Protein accessionYP_001476277 
Protein GI157368288 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.257163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCA GTACTTATTC CACGACAATC AAAAGGATGA ATCGGCGTAT TATTCCATTT 
ATTATGCTGC TTTATCTTAT TGCATATATA GACAGATCTA ATATTTCCAT TGCTGCATTG
CAGATGAATG CCGATTTGGC GCTTAGCGCC GAGATGTATG GTATTGCCGC AGGGATTTTC
TATATTTCCT ACATTATTTT TGAAGTCCCC AGCAATATAT TATTGAGCCG TATCGGTGCC
AAGATATGGA TTGCGCGCAT CATGGTCACC TGGGGCATCA TCGCCGCCGG TATGAGCCTG
GTACAAACGC CAACGCAACT CTATGTGATG CGTTTTTTAC TTGGTGTGGC GGAGGCCGGG
TTTACCCCTG GCATTATTTA TTATCTTTCC TGTTGGTATC CGCGCAGTGA CCGTGCGCGT
GCCATGTCGA TGTTTTACAT CGGTGCAGCC CTGGCTTCGG TTATTGGCCT GCCGCTGTCC
GGCAGCATCC TGAATATGCA TGGTTTATTT GACATAGCAG GGTGGCGTTG GTTGTTCCTG
CTGGAAGGTA TTCCGGCGGT GTTGCTGGGC ATCGTCACCT ATTTTTACCT CGATGATGCG
CCGCAACAGG CAAAATGGTT GGCGCCGCCG CAACGTCAGT GGCTGGTTAA TAAAATGGCC
GGTGAAATGG CGGAGACCGC TGGCGGACAA TCACATCGCT GGAGCCAGGC GTTGACCAAC
CGGCGGGTTT GGGCGCTGAG CTTTATGTGG CTGTTGCAGG CGTTCGGCAC CATAGGTATC
ACGCTATTTT TACCCTTGAT CGTCAAGGGT GTAGTCACGG AGCAAAGCTC CTTTGTTGTC
AATGTCCTTT CCGCCATTCC GTTTTTCTTT GCCTGCATTT TCATGTACTT CAACGGTAGG
CACTCCGATT TGACCGGTGA GCGATCCCTG CATTTGGGGG GGCCGCTGAT TGCCGCCGGT
CTGCTGCTGC TGGCGGCGAT TTATTGTCAA AATCTGGTGT TGGCCTACGG CATGTTGGTG
CTTACCGTCG CGTTGAACTG GGCGATCACC CCTATTTTCT GGGCGGTAAC CACCGAATCT
ATCGCCGGCG TGGCTGGTGC GGCGTCAATA GCCTTGATTA ATGCGGTGGC CAATATTGCC
GGCCTGGTCT TTCCACCGGT CATGGGGCGA ATTAAAGATA TTACCGGCAA CTATGATATT
GCGCTGATGG CCATCGCTGC GGCGTTGGTG GCTGGCGGCA TTATCGGCCT GCGGCTTGGC
AGGCCGCTAT CAGCGGCCAC AGGCGAGGTT GCACTGCGGG AGAACAACCA TGGCTGA
 
Protein sequence
MDSSTYSTTI KRMNRRIIPF IMLLYLIAYI DRSNISIAAL QMNADLALSA EMYGIAAGIF 
YISYIIFEVP SNILLSRIGA KIWIARIMVT WGIIAAGMSL VQTPTQLYVM RFLLGVAEAG
FTPGIIYYLS CWYPRSDRAR AMSMFYIGAA LASVIGLPLS GSILNMHGLF DIAGWRWLFL
LEGIPAVLLG IVTYFYLDDA PQQAKWLAPP QRQWLVNKMA GEMAETAGGQ SHRWSQALTN
RRVWALSFMW LLQAFGTIGI TLFLPLIVKG VVTEQSSFVV NVLSAIPFFF ACIFMYFNGR
HSDLTGERSL HLGGPLIAAG LLLLAAIYCQ NLVLAYGMLV LTVALNWAIT PIFWAVTTES
IAGVAGAASI ALINAVANIA GLVFPPVMGR IKDITGNYDI ALMAIAAALV AGGIIGLRLG
RPLSAATGEV ALRENNHG