Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4139 |
Symbol | |
ID | 5664523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5029569 |
End bp | 5030243 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238803 |
Product | cytoplasmic chaperone TorD family protein |
Protein accession | YP_001503984 |
Protein GI | 157963950 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT TAGTAAGAGA AGTTTCAGAA AACGATCAGT TAAGAGCCGA TATTTATCAG TTGTTAGCTG CGTTATTACG TCGCCAACCA AGCCCAGAGT TGCTTGCGTT CTTATCGGGC TTAGAAATTG ATGCTGACGA CGACAGCGAC ATGACTAAAG CTTGGGTTGG ACTTAAATTA GCCGCACAGC AATTTAGCGA AGAACAGCTT GAAGATGAGT ATTTCAACGT GTTCCTTGGC GTAGGCTGTG GCGAAATCCT GCCTTACGGC AGCTGGTTTA TGACAGGTTC TTTGATGGAC AAGCCATTAG CCTTATTACG TAACGACCTA ATGCAGTTAG GTTTTGAGCG TGAAGAAGAT GTGAAAGAGC CTGAAGATCA CGTGGCTGCA CTATGTGAAG TAATGGGCAC TTTGATTTTA GAAGCTCCAG GTTACCGTCA GCTTGCCTTC TACCAGCGCC ACATGGGTAG CTGGATTGAA CGCTTCTGTG ACAATTTAGC TAAGGCGCCA AGCGCCGCCT TCTATGCCAC AGTCGCTCAA TTGGCTAAGG CGTTTTTCGT TATCGAAGCG AGAGAGTTTG AGCAATTGAG TCTAGACATT CCTGTTAACT GCCCTGGCAG TGAAGCGGAA GCGTCAGAAA AGATTGAGCC TGCTACCAAC GAGTTAGCGT CTTAA
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Protein sequence | MTELVREVSE NDQLRADIYQ LLAALLRRQP SPELLAFLSG LEIDADDDSD MTKAWVGLKL AAQQFSEEQL EDEYFNVFLG VGCGEILPYG SWFMTGSLMD KPLALLRNDL MQLGFEREED VKEPEDHVAA LCEVMGTLIL EAPGYRQLAF YQRHMGSWIE RFCDNLAKAP SAAFYATVAQ LAKAFFVIEA REFEQLSLDI PVNCPGSEAE ASEKIEPATN ELAS
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