| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2307 |
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| Symbol | |
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| ID | 5662700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2802433 |
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| End bp | 2804463 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236917 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001502162 |
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| Protein GI | 157962128 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.267261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATCA AAAGCCTGGT GATCAATAAC TTTCGAGTAT TTCGTGGCGT ACACGAGATT
GACTTAGAAC CAAGAGTAAC CCGTAAACAC CAAACTGCTG CATCGCCTAT CGTGTTATTT
GGTGGATTAA ATGGTGCAGG TAAAACCTCT ATTTTATCTG CAGTCCGTGT GGCCTTGTAC
GGCCGCGCAG CATTTGGCCG CGGCATGAAC TCAGCTCAAT ATCAAGAGCA ACTAGATGCA
CTGATTCATA ATGGTGTAGG GATTAGTGCA GACAAAGCGT CAATCCAGCT CATCTTTACT
CATAGCCAAA ATGGTGTTGA AAGCGAATAT CGCGTCACTC GTGGTTGGAA GCGTGGCCAA
AAAGATAAAT TGGTTTTAGA GCAGAACAAC ACTGAACTCA GTAGCATGAG TTACGATCAA
TGCCAAAGCT TCCTTAATGA GCTTATCCCG CCGGGGATCT CAGACCTATT CTTCTTCGAC
GGGGAAAAAA TTGCCGATCT TGCAGAAGAT GAATCCGGTG AAGTACTGCA AACTGCAGTT
AGACGCCTTT TAGGTATTGA TGTTGCCGAG CGTTTGCGTA GTGATTTAGC TATCTATCTA
AAACGCCATG ATGCCGCAGC AATGCCAGAT AACATCAAAG CTCAAATTGA CAAGTTAGAA
TCTGATCGCA CTGCAGCCGA ACATGCCGCT GTAGAGCTAA CTAACAAAGC ATCATTGTGC
CGCGCAAAAA TCGAACTAAT AGCTAAAGAT ATCGAAAAAA CCGAACTTGA TCTATCTTCA
CGAGGTGGTG CTTGGGCACA AAGCCGTGAG CAAGAAAAGG CTAAACAGTT TGAACTAGAC
GCTGAACGCA AAGAACTAGA AAAAACACTA CGGGCGGAGA TTGAAGGTGA CCTACCATTT
GCATTGGCCC CCAATGCAAT GCAAGCACTA CTCACTCAAT TAGAAGCCGA AAAGAAAGCT
AAGCAAGCTG ATAGTTTTAA CTCTGAGCTA AAGGGCTTCT TAACTGAATT AGAGCAGAAG
TTATCATTCT CGCTATCTAA CTCCTTTGTC GCAATAGAAA CAATCAAAGA ATGTTTAAAT
GATCGTGAAT CACAGCAGGT AAAGACTGAT ATCCAGCTTG ATTTAGCAGA TAGAGAGTAC
GATCAAATTA AAGCGCAGAT TAACAACCAA GCGCCCTCTT CCTATAAGCG TTTTGACGAA
GCACGTAAAC GCTTAGCTAT AGTTGAAGAG CAACTAGATT CTATCTCAAT TAATATTGCC
CGCGCACCAG AGCAAGAACA ACTGGAGACG CAACTTGAAG CGTTAAAAGA GCTTAATAGC
CGCCGCACCG CTGCAATTGT AGAGCATAGA GATACGACTG AAGCGGCGAA ACGAAAATAC
CGTGAAGCAA TTGATTACGC ACGTAAAGTA CAAAAGCTGC ATGACAAGCA TAAAGTCGCC
TCTACCGCTG AAGCATCGCT AACAAACGCG CAAAATACCC ATGCATTGTT AGCAGAATTC
AGTGAGCAAC TAACTGCAGT ACGTGTTAAA CAACTAGAAG CTGAGTTTAT CAAAAGCTAT
CAAAAGCTGG CACGTAAAGA AGACCTAAAG CTTTCAGCAC GCATCAACAC TACTACCTTT
GACGTTGAGT TAATCGATGA GGATCAGCAC ACCATTAGCC GTAGAGGCCT GTCTGCCGGT
GAAAAACAGA TCTACGCTAT TTCAATTCTC GAAGCATTAG GTAAAACATC GGGTAAGAAA
CTGCCAATCA TTATCGATAC ACCGCTAGGT CGACTTGACT CTAAACACAG AGATAAGTTG
ATTGAGCACT ACTTCCCTGA GGCCAGCCAT CAAGTAATCA TTCTGTCTAC CGATACAGAG
ATTGATGAAG CGTACTTTGG AGAGGATTAT CTAAAAGATG ACATTTCTCA TGCCTTTGAG
ATTCAGTTTG ATGCCGCCAC TAAATCATCA AAACTGCGTG AAGGTTATTT CTGGGAACAG
AACTCTGCTA ATAATGAAGT GCAACAAAAT TCAGTAGTAG GAGCCAACTA A
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| Protein sequence | MIIKSLVINN FRVFRGVHEI DLEPRVTRKH QTAASPIVLF GGLNGAGKTS ILSAVRVALY
GRAAFGRGMN SAQYQEQLDA LIHNGVGISA DKASIQLIFT HSQNGVESEY RVTRGWKRGQ
KDKLVLEQNN TELSSMSYDQ CQSFLNELIP PGISDLFFFD GEKIADLAED ESGEVLQTAV
RRLLGIDVAE RLRSDLAIYL KRHDAAAMPD NIKAQIDKLE SDRTAAEHAA VELTNKASLC
RAKIELIAKD IEKTELDLSS RGGAWAQSRE QEKAKQFELD AERKELEKTL RAEIEGDLPF
ALAPNAMQAL LTQLEAEKKA KQADSFNSEL KGFLTELEQK LSFSLSNSFV AIETIKECLN
DRESQQVKTD IQLDLADREY DQIKAQINNQ APSSYKRFDE ARKRLAIVEE QLDSISINIA
RAPEQEQLET QLEALKELNS RRTAAIVEHR DTTEAAKRKY REAIDYARKV QKLHDKHKVA
STAEASLTNA QNTHALLAEF SEQLTAVRVK QLEAEFIKSY QKLARKEDLK LSARINTTTF
DVELIDEDQH TISRRGLSAG EKQIYAISIL EALGKTSGKK LPIIIDTPLG RLDSKHRDKL
IEHYFPEASH QVIILSTDTE IDEAYFGEDY LKDDISHAFE IQFDAATKSS KLREGYFWEQ
NSANNEVQQN SVVGAN
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