Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2157 |
Symbol | |
ID | 5662550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2611039 |
End bp | 2612193 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236760 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_001502012 |
Protein GI | 157961978 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATG CCGTTGATGC TACAAATCCT GTTGATCCAG TGTATGAGCT TAAAACCGAT TTAACTGAAA TGCTGGGTTG CCGCTATCCC ATTGTCCAAA CCGCAATGGG TTGGGTGTCA GACGCAAACT TGGTGATTGC AACCACAAAA GCGGGCGGAT TTGGATTCTT AGCCGGTGCG ACAATAGAGG CTTCTGAGCT AGAAAATGAA ATTCTCAAGG TTATTACTGC CACTGGGAAT AGTCATTTTG GTCTCAATTT TCATATGTTC CAAGAGAATG CCAAAGAGTG TGTTGATCTC GCGATCAAGT ACTCCCTTAG AGCCGTTAGT TATGGCCGAG GCCCAGATAA ACAAACCATC TCGCGGCTAA AAGCAGCAAA AGTGTTATGT ATCCCTACCG TTGGCGCACT GAAACATGCG TTAAAAGCGC AAGCGCTAGG GGCTGACATC ATCACGATTC AAGGTGGAGA AGGTGGTGGC CATACTGGCG GTGTGCCTTC AAGCATACTC TTACCCCAAG TACTCGATGC GGTATCGATT CCAGTAATTG CGGCAGGTGG ATTCTCAACC GGACGTGGTT TAGCTGCAGC TTTAGCTTCT GGAGCATGCG GTATAGCAAT GGGGACTCGT TTTTTAATGA CCTCTGACTC ACCCACACCG GCACATACGC TCAATAAGTA TTTGGAAGTT AACGACACCC AAGCTATTAA AGTGACAACA GCTGTAGATG GTATGCGCCA TAGAATGATT AATTCTCCAT TTATTGCGCG CCTTGAAAAA GCCAGCCCAT TTGGGCGTCT ACGGATCGCA CTAGCAAGTG CATGGTACTG GAAAAATGAA ACCGGAATGA CATTTGCCCA CATGGTCAAA GTGTTTATCG AATCGGTGAA AACTGAGCCT GGGGCCGTGT CTCAAGTTGT TATGTCCGCA AATCAGCCAG TGTTATTACA GCGTTCAATG GTCGATGGCC AACCCAATGA AGGCATTCTG CCAAGTGGTC AAGTTGCAGC CTCAATTAAT GAACTTATCA GTGTCGATCA GCTAGTAACC GATATCGTAA AACAAGCACA TCAATGCTTA AGCCAACTTC AGGCTCGAAC ATTAATTACC GAGACACCAA TCAATAAAAA TCACTCTACA AAGGAGGCTA GCTAA
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Protein sequence | MSHAVDATNP VDPVYELKTD LTEMLGCRYP IVQTAMGWVS DANLVIATTK AGGFGFLAGA TIEASELENE ILKVITATGN SHFGLNFHMF QENAKECVDL AIKYSLRAVS YGRGPDKQTI SRLKAAKVLC IPTVGALKHA LKAQALGADI ITIQGGEGGG HTGGVPSSIL LPQVLDAVSI PVIAAGGFST GRGLAAALAS GACGIAMGTR FLMTSDSPTP AHTLNKYLEV NDTQAIKVTT AVDGMRHRMI NSPFIARLEK ASPFGRLRIA LASAWYWKNE TGMTFAHMVK VFIESVKTEP GAVSQVVMSA NQPVLLQRSM VDGQPNEGIL PSGQVAASIN ELISVDQLVT DIVKQAHQCL SQLQARTLIT ETPINKNHST KEAS
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