| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0513 |
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| Symbol | |
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| ID | 5660913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 626672 |
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| End bp | 627955 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235051 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001500376 |
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| Protein GI | 157960342 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATAAAG TTACTCCTTA TCTGGAGTTG GATGAAGAGG CTAAGCAATT AGTCGATCAT
GCGAATAATA AAACCATTAC GCTGACGGTG TCGGAGTCGG CAGTTTTACA TCAACTGATC
CTTTCCATTA GCTCGGTGTG CACTAAAGAA GATTTGTTGG CCGCTGGCTG GCCCGAGCGT
GTTGTTGCCG CAACCTCGCT AACACAGTGT GTTAGCACTC TAAGAAAGAA GTTAGAACCT
TATCCAGAGG TGGTGCTGCG TACTATCGCT GGACGTGGTT ATCAGCTTAA CGTATCTACA
CGCTCTCATA TTAAAATGTT GGCGGTTAAT GATGCCGAAT CTGTACGTGC AGCACTGGTT
GATGTGTCTT TGTTGGTAAA ACTAAGCGGC ATAGTCATTT TGATCTTAAT TGCTCTATCC
ATGTGGTATT TTAGTGATTA TCACGGTGTG GTAAAAGCAA AGAATAGCTG GGATGCAACT
AAGAAAGTAC CTCTAAATAT TGGTGGCACT GAGCAAGATG TTCAGCTTAT CCATAAAGAT
AATGTCGCCC ATCTGCACCC GTCAATGTGG CAAAAGCACC TGGCACCCGA GTCTAATCAT
CTGGACGGCA TGAGCAAGTT TAACGGCTAT GCGCTAACCG ATGGTAATTA CTATTCGATG
GCTGTATGCC CTGATGCTGA TCAGAATAAG TGTTTGGGTA AAGGCCTAAT CAACATCACA
GCGATTGATT TAACGCCAGC GGGTTTGAAT ATGCAAACCT TTACTGAGTT GACTCATAAG
ATGGAGAAAC GTATTCGCTA TAACCGGGTG ATTATCCCTC ATGACGAGCC CGGTACCAGT
GGTTTTGTTG AGCATCATTA TCATGCTGAT GTGTATTACC CTGTGCAAGG GAATATGTTG
GTACGCTCGG ATATCAGTTT GTCGCTGATC TATAAAGGTG AGAACGTAGG TAAGTTTTAT
TCAGCAGCTT GCGTGACTGA CGAAGAGTGC GAGACCACAC CAATAAAGTA CAAGATTAAA
GGTGATTTTA CTCAGTATCG CGAAAAAATT AATGACTTGG ATGTGGATGT GTTTCACGTA
AAAGTCACTC AAAAAGATCT CATTAATCCT GAACATGTCA GCCCGTCGGC AATGCATTTT
TATCGTGAGA TCCGTAAGCA CGAGATCATC GATAGCGACC TGTATTTTTA TCGTATCTAT
AAAGATTCTG AAACTGCCGT TTGGATCGTA CCAATCTTAG GTAACCTTGT GGCTTGGTAT
GAGTATGACA AGGTGAAGCT TTAA
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| Protein sequence | MHKVTPYLEL DEEAKQLVDH ANNKTITLTV SESAVLHQLI LSISSVCTKE DLLAAGWPER
VVAATSLTQC VSTLRKKLEP YPEVVLRTIA GRGYQLNVST RSHIKMLAVN DAESVRAALV
DVSLLVKLSG IVILILIALS MWYFSDYHGV VKAKNSWDAT KKVPLNIGGT EQDVQLIHKD
NVAHLHPSMW QKHLAPESNH LDGMSKFNGY ALTDGNYYSM AVCPDADQNK CLGKGLINIT
AIDLTPAGLN MQTFTELTHK MEKRIRYNRV IIPHDEPGTS GFVEHHYHAD VYYPVQGNML
VRSDISLSLI YKGENVGKFY SAACVTDEEC ETTPIKYKIK GDFTQYREKI NDLDVDVFHV
KVTQKDLINP EHVSPSAMHF YREIRKHEII DSDLYFYRIY KDSETAVWIV PILGNLVAWY
EYDKVKL
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