| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0349 |
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| Symbol | |
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| ID | 5660749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 396382 |
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| End bp | 397932 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641234879 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001500212 |
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| Protein GI | 157960178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGCTC TAGCATCACA ATCGCAACTG GATTTGGCTC ACTATTATCT GCAGAAAACT
TTGCTGTCAT CGGTTTATGA TGTGGCAAAA GTTACGCCGC TTTCCAGCCT TAATAAACTG
TCTGCGCGCT TAGGCTGTCA GGTATTTTTA AAACGTGAAG ATATGCAGCC TGTACACTCT
TTCAAGCTGC GCGGTGCTTA CAACAAGATA GCCGAATTGA CTAAAGAGGA ATGTGAATGT
GGCGTGGTGT GCGCCTCGGC GGGCAACCAT GCTCAAGGCG TTGCTATGTC GGCGTCAGCT
CGTGGTATTA GCGCGGTTAT TGTGATGCCA GAGACCACTC CTGACATTAA GGTGGATGCG
GTTAGGCGTT TAGGTGGTGA AGTGGTACTT CATGGCCAAG CGTTCGATCA GGCTAATGCT
TATGCCCAAA CTCTTGCGAA GAATGAAGGT CGAGTCTATG TGGCGCCATT CGATGATGAA
GCTGTGATTG CAGGGCAAGG CACGGTGGCG CAAGAGATGT TGCAGCAGCA GCGCGATCTT
GAGGTGGTCT TTGTGCCTGT GGGCGGTGGC GGCTTGATTG CAGGGGTTGC GGCTTACTAT
AAAGCGGTCA TGCCACAGGT GAAGATTATT GGTGTCGAGC CGGAAGACTC AGCCTGTTTA
AAGGCTGCAC TGGATGCCGG TGAGCGAGTG ATATTGCCGC AAGTTGGCTT GTTTGCCGAT
GGTGTGGCGG TTAAACAGAT AGGCGCCGAG CCTTTTAGAT TAGCTCGTGA GTACGTCGAT
GATGTGATCA CCGTGACCTC AGATGAAATC TGCGCCGCGG TGAAAGATAT CTTCGAAGAC
ACTCGCGCCA TTGCCGAGCC GTCTGGAGCA TTGTCGCTAG CAGGGCTGAA GAAGTATATC
GGCAGTAACG GTAACGGTGA GAAAGTCGGT GCTATTTTGA GTGGCGCTAA CGTGAACTTT
CATAGCCTGC GCTATGTGTC TGAACGCTGT GAACTCGGTG AGCAGAAAGA AGCGATTTTG
GCGGTGAAAG TACCAGAGCG CCCTGGCGTG TTTCTGCGCT TTTGTGAGCT GCTAGACAAG
CGAGCGATGA CCGAATTTAA CTACCGTTTC TGTAGCCGTG ATAAGGCGGT GGTATTTGCG
GGAATTCGTT TGACTCAGGG GCAAAGTGAG CTCGATGGGA TTATCGCCAA GCTGGAGTCT
GAAGGTTTTG ATGTGCAAGA CCTGTCTAAT GATGAAACTG CCAAATTGCA TGTGCGTTAC
ATGGTGGGTG GTCAGCCGCC AGAGCCACTT GAGGAGCGTT TGTTTAGCTT TGAGTTCCCT
GAGCACCCTG GCGCACTGCT TAAGTTTTTA ACCACCTTGC AGAGTAAGTG GAATATCAGC
CTATTTCATT ATCGTAATCA TGGCGCAGCC TACGGCCGAG TATTGGCAGG ATTTGAGGTG
CCAGAAAGCG ATAATTTGGC GTTTAAACAG TTTTTAACTG AGTTAGGTTT TGTCTATCAA
GAGGAAACTG ATAGCCCGGC TTATCAGCTT TTCTTGGATA ACCGTAATTA G
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| Protein sequence | MLALASQSQL DLAHYYLQKT LLSSVYDVAK VTPLSSLNKL SARLGCQVFL KREDMQPVHS
FKLRGAYNKI AELTKEECEC GVVCASAGNH AQGVAMSASA RGISAVIVMP ETTPDIKVDA
VRRLGGEVVL HGQAFDQANA YAQTLAKNEG RVYVAPFDDE AVIAGQGTVA QEMLQQQRDL
EVVFVPVGGG GLIAGVAAYY KAVMPQVKII GVEPEDSACL KAALDAGERV ILPQVGLFAD
GVAVKQIGAE PFRLAREYVD DVITVTSDEI CAAVKDIFED TRAIAEPSGA LSLAGLKKYI
GSNGNGEKVG AILSGANVNF HSLRYVSERC ELGEQKEAIL AVKVPERPGV FLRFCELLDK
RAMTEFNYRF CSRDKAVVFA GIRLTQGQSE LDGIIAKLES EGFDVQDLSN DETAKLHVRY
MVGGQPPEPL EERLFSFEFP EHPGALLKFL TTLQSKWNIS LFHYRNHGAA YGRVLAGFEV
PESDNLAFKQ FLTELGFVYQ EETDSPAYQL FLDNRN
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