| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0223 |
|---|
| Symbol | |
|---|
| ID | 5664668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 249650 |
|---|
| End bp | 250924 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641234752 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_001500086 |
|---|
| Protein GI | 157960052 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAG AAATGATTTG TACGGGCGAA GAGGTGTTGG CTGGCCAGAT AGTCGATACA
AATGCTGCAT GGTTCGGTAA TACCATGATG GAACATGGTA TCGAGTGTCA AAGGCGTGTG
ACAGTTGGTG ATCGCTTAGA AGATCTCGTC TCAGTATTTA AAGAACGCAG CCATGAGGCT
GATGTGATTT TAGTTAATGG TGGTCTCGGA CCGACAAGTG ATGATCTCTC TGCTGAAGCG
ATGTCACTCG CTAAGGGAGA GGCCTTAGTC GAGAACGAAA TTTGGCGAGA GAGGTTGGAA
AATTGGTTTA CCCGTAACGG CCGAGTAATG GCGCTGAGTA ATCTTAAGCA AGCTATGTTA
CCTGAGTCAG CCATTATGAT AGATAATCCT GTTGGGACGG CTTGTGGTTT CGCTGTAAAA
CTCAATCGTG CATGGTTATT TTTTACCCCT GGCGTCCCAT TTGAATTTAA ACAGATGGTC
TATGAACAGT TTATACCTTT CGTTAAGCAG CGATTTGATA TTGCAGGTGA TGTAGCGCTA
AGGAAGCTCC TAACCTTAGG TCAAGGAGAA TCATCGCTTG CAGATACGCT CGAGCAGATA
GATTTGCCTA GTGGGATTAC CATAGGTTAC CGCTCTTTTA TGCCGCATAT AGAGATAAAG
CTATTCGCTC GTGGTGTAGG AGCAATTGCT CAGCTTGACA GACTCGAAGC GCAAATAAGA
TTTCTACTGG GCAATGCTAT CGTTGCTTGT GATAGGAAAA GCTTAGCTGA AGAGATCCAC
TCTCTAATGG TAAATTCTGG GCTAAGCCTC AGTACCGCGG AGTCTTGTAC CGGTGGCATG
ATAGCAAGTC AACTGATCGA CCTCTCTGGG AGTTCATCCT ATTTAGATCA AGGTTTAGTG
ACTTATAGTA ATGAGTCTAA GGTTCGAGTA TTAGGTGTTA AGCCTGAGAC ATTAGACGAT
CACGGGGCAG TCTCTATCGC TACTGTAGAA GAGATGGCTA AGGGAGTAAG ATCAATTCTT
AATAGTGACT TTGCGCTAGC GACAAGTGGC ATAGCAGGCC CTACAGGTGG TACTGATGAT
AAGCCTGTTG GCACGGTTGC CATTGCTCTA GCGACGAAAG GGGGTGTTTA TAGTCAGATG
ATTAAGCTAC CTCGACGTTC TCGCGAATTA GTGCGTAGTT TAAGTACTGC CGTCGCATTC
GATATGTTAA GAAGAGAGCT GTTAGGTGAG GCGGTTATCG TCGATTATGG TTCGATTGGC
CGTTTCCAAA AATAA
|
|---|
| Protein sequence | MKLEMICTGE EVLAGQIVDT NAAWFGNTMM EHGIECQRRV TVGDRLEDLV SVFKERSHEA
DVILVNGGLG PTSDDLSAEA MSLAKGEALV ENEIWRERLE NWFTRNGRVM ALSNLKQAML
PESAIMIDNP VGTACGFAVK LNRAWLFFTP GVPFEFKQMV YEQFIPFVKQ RFDIAGDVAL
RKLLTLGQGE SSLADTLEQI DLPSGITIGY RSFMPHIEIK LFARGVGAIA QLDRLEAQIR
FLLGNAIVAC DRKSLAEEIH SLMVNSGLSL STAESCTGGM IASQLIDLSG SSSYLDQGLV
TYSNESKVRV LGVKPETLDD HGAVSIATVE EMAKGVRSIL NSDFALATSG IAGPTGGTDD
KPVGTVAIAL ATKGGVYSQM IKLPRRSREL VRSLSTAVAF DMLRRELLGE AVIVDYGSIG
RFQK
|
|---|
| |