Gene Snas_6438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6438 
Symbol 
ID8887664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6790437 
End bp6792479 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515147 
Protein GI291303869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.541051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCTT TTGCCCAGCT CCGTAACCTC GACACCTCCA AGCTCACCAA GGCCGCCGAC 
ACCGCCGTGA AGGTCGGCAA GGACATGGAA TCCCGCGCCG GGGACGTCAA CGACGTGGCC
AAGCGCGGCG GCGACGGCTC CGACTTCTGG GCCGGTGTCG ACGCCGACGC CCAGAACGCG
CTGCTGACCA CCTTTCCGCC GCCGCTCAAC GCCGCCGGAA CCGTCTTCAA GTCCTCGGCG
GGAACGGTCG ACAAACTCGT CGACGAACTC GACGCCGCCA AGAACGAGAT CGACACCGCG
ATCTCGTCCT ACCCCCGGCT CATCGTCGGC GACGACGGCA GCGTCACCTA TCCGCCGACC
AACAGTGCCG AAGACGCGAA ACAGATGCAG GCCCAGGCCC AGGATCTGGC CGCGAAACTG
AAGGCGGCCG TCGACCGCGC CAACGCCGCC GACACCGCCG CCTCGGGCGA GCTGGCGCAG
CACGACCTCG GCGCCGGGAA ACCCGTCCAG GTCAAGCTTC CCGACGGTTC GTACTACCTG
ACCACCGGCG ACAAGGACAA CGAGGTCAAG GTCAAGAACG ACCAGAACGG CAACCTGATC
GTCACCGTCG ACGGCGAGGA CTTCAAGTAC GACAAGGGAA CCAAGCTGAC GCTCAACACC
GGCGACGGTG AGGACAATGT CGACATCAAC GAGCACGTCA ACAACGACAT CAACGTCAGC
ACCGGCGACG GCAAGGACGT CGTCACCGAC CACGACTCCA AGGGCCAGCG CACCATCTCC
ACCGGCGCGG GCGACGACAC CGTCGCCGTG ACCGGCCAGG ACCGCAACAT CTTCACCGAG
GCGGGCGACG ACAAGGTCAC CGCCATCGGC GACAAGAACA ATGTGGGCAC CGGTGACGGC
AACGACGACG TCAAGACCAC CGGCGGCACC GCGTACGCGG GCGACGGCGA CGACAAGATC
CGCGCCGGGA ACCACGACGA CCCGCTGTAC AAGGACGCCG ACGAGCACGA CACCACCATC
TACGGCAACG ACGGCGACGA CGAGATCCAG GGCAGCACCA AGAACGACAC GATCTCCGGC
GGCAAGGGCG AGGACGAGAT CTACGGCCAC GAGGGCGACG ACGTCATCGC GGGCAACGAC
GACCACGACT ACATCGACGG CCAGGACGGC AACGACAAGA TCTCCGGCGG CGGCGACAAG
GACGTCCTGT ATGGACTGGA CGGCAACGAC GCCATCGACG GCGGCGCGGG CCGCGACTAC
CTGGAGGGCG GCGACGACAA GGACGTGCTC ACCGGCGGTG CCGAGGAGGA CGTGCTGTCC
GGCGGGCGCG GCGATGACGA CCTGCGCGGC GGCGACGCCG ACGACGTCAC CTACGCCGGT
GAGGGCAAGG ACACGATCGA CGGCGGCGCC GGCAACGACA AGTCCTTCGT CCAGGACGGC
GACACCGTCG CCAAGGACAA GGGCGACACG GTGCAGAAGG TCGACATCGC CGACAACAGC
TTCATCAAGA TCGACGGTTC CGACGAGTTC CAGGACCGGA TCCGCGCCGA CCTGGACATG
TACAGCTCGT CACCGACCGG CCGCCAGATG ATCGAGAACC TCTCCGACGG CGTCGACAAC
AGCCGTCACG ACTGGATGCC CGGCGAGCGG GAGCTGGTCA TCAACGAGAA CGACGAGGAC
AACGGCGAGG CCCAGCCCGG ACTGGACGGC TTCCTCGGCC ACGACGTGAA CATCAACATC
AACCCGGAGT ACGACGGATC GCCCTACCAG CACCAGCTGA ACAGCACTCC ATATGAGAAG
GTGCCCGCCC ACACGCTCTA CCACGAGCTG GGGCACGCGT ACGACTTCTA CAACGACACC
AGTCTCGACG GCGACTACTC CGACGGCTCA CCCCGGGACG AACGCCAGGC CGTGGGTCTG
CCCACTGTCG ACCATGACAA CAACCCGAAG ACGCCCGACG TCGTCGACCC CGACCATCCC
AAGCAGTACA CCGAGAACGG CCTGCGGGAG GAACAGGGCC GCGAGCCACG GCCGCAGTAC
TAG
 
Protein sequence
MVSFAQLRNL DTSKLTKAAD TAVKVGKDME SRAGDVNDVA KRGGDGSDFW AGVDADAQNA 
LLTTFPPPLN AAGTVFKSSA GTVDKLVDEL DAAKNEIDTA ISSYPRLIVG DDGSVTYPPT
NSAEDAKQMQ AQAQDLAAKL KAAVDRANAA DTAASGELAQ HDLGAGKPVQ VKLPDGSYYL
TTGDKDNEVK VKNDQNGNLI VTVDGEDFKY DKGTKLTLNT GDGEDNVDIN EHVNNDINVS
TGDGKDVVTD HDSKGQRTIS TGAGDDTVAV TGQDRNIFTE AGDDKVTAIG DKNNVGTGDG
NDDVKTTGGT AYAGDGDDKI RAGNHDDPLY KDADEHDTTI YGNDGDDEIQ GSTKNDTISG
GKGEDEIYGH EGDDVIAGND DHDYIDGQDG NDKISGGGDK DVLYGLDGND AIDGGAGRDY
LEGGDDKDVL TGGAEEDVLS GGRGDDDLRG GDADDVTYAG EGKDTIDGGA GNDKSFVQDG
DTVAKDKGDT VQKVDIADNS FIKIDGSDEF QDRIRADLDM YSSSPTGRQM IENLSDGVDN
SRHDWMPGER ELVINENDED NGEAQPGLDG FLGHDVNINI NPEYDGSPYQ HQLNSTPYEK
VPAHTLYHEL GHAYDFYNDT SLDGDYSDGS PRDERQAVGL PTVDHDNNPK TPDVVDPDHP
KQYTENGLRE EQGREPRPQY