| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6374 |
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| Symbol | |
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| ID | 8887600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6722911 |
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| End bp | 6726039 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003515083 |
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| Protein GI | 291303805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGGC CGTTCGAGGT TCGCCGGGAA GACGGCAGTA CCGCCGACGT ACCGGGCGCC
CGGTTGCGGG GCCTGTTGAT CGCGTTGGCG CTGAACCCGG GACGGGTGGT CCAGAAGGGG
ACGCTCGTCG ACTGGATCTG GGGCGAACAG CCGCCCTCCG ACGCCGCGAA CGCCTTGCAG
CGCTTGGTGT CGCGGTTGCG GAAGGTGCTG CCGCCGGGCT CGGTCGAGGG CCAGACCGAC
GGGTACCGGC TGAACCTGGA TCCCGAAGCC GTTGACGCGG TGCGGTTCGA GCGGCTGGTG
AGCCGGTCCC GCGACGACGA CAACCCGCTG CGGGTGCGGC GGCTGCGAGA GGCGCTCGAC
CTGTGGCGGG GCGCGGCCAT GCAGGACGTC GGGCTGCCCG ACAGTGCCTC CTTCGACGCG
GCCGTCACCC GGCTGGAGCG GCTGCGGTTG AGCGCCGTCG AGGAGCGCTT CGACGCCGAG
GTCGGGCTCG GCCACGGCGC GGACCTGGTC GAGGAACTGA CCGATCTGGT GGCCGCGAAC
CCGGGCCGGG AGCGGCTGGC CGCCGCGTTG ATGCGGGCGC TGGTCATGGC GGGACGCGAC
AACGAGGCGC TGCTGGTCTA CGAGCGCACC AAGGAGGCGC TGGCCGACGC GCTGGGTGTC
GACCCCTCGC CGGAGCTGTC GGAACTGCAC GTCGCGCTGC TGCGGGGCGA GCTGGGACGG
CAGGAGGAGA ACCGTGACAC CAACCTGCGC GAGGAGCTCA CCAACTACAT CGGCAAGGAC
GCCGACGTCA CCGCGGTCGG CAAGCTCATC GGCGAACACC GGCTCACCAC CCTGACCGGA
CCGGGCGGCT CCGGGAAGAC CCGGATGGCG ACCGAGACCG CGCGCACGCT GCTGACCGAC
CTGCCCGACG GGGCGTGGCT GGTGGAACTG GCGGCCATCG GCGCCGACGG CGACGTGGCG
CAGGCGGCGC TCACCGCGCT GGGGCTGCGG GACGCGCTGC TGGGCGAGCC GTCCACTCTG
GATCCGACCG AACGGCTCGT CGCCGCGTTG CGCGACCGGG ACGCGCTGTT GATCCTGGAC
AACTGCGAGC ACGTCATCGA GTCGGCCGCC GCCCTGGCGC ACCGGCTGCT GGGCGAGTGC
CGACGGCTGC GGATCCTCGC CACCAGCCGG GAACCGCTCG GCATCACCGG TGAGGCACTG
TGGCCGGTCG GGCCGCTGGA GCTGCCGGAC GAGGACGCCG ACCTCGACGC GATCGAGGCC
GCGCCGGCGG TCCAACTGCT GCGGGACCGG GCCCGGGCGG TGCGCAAGGA CTTCGCCGTC
GACGCCCCCA CCCTGGCGAC GATGGCCCGG ATCTGCCGGA CGTTGGACGG GATGCCGCTG
GCGATCGAAC TGGCCGCGGC CCGGTTGCGC ATCATGACCA TCGAACAGCT CGCCACCCGG
CTCGACGACC GGTTCCGGGT GTTGACCGGC GGCAGCCGCA CCGCGCTGCC CCGGCACCGG
ACGCTGCGCG CGATGGTCGA CTGGAGCTGG GAACTGCTGT CCGACGCCGA ACGGACGGTG
CTGCGTCGGC TGTCGGTGTT CGCGGGCGGA GCCAGCCTGG AGGCCGCCGA ACGCGTCTGC
GGCGGCGACA CGGTCGAAGT CGACGAGGTG CTGGAACTGC TCGCCGCGCT GACCGAGAAG
TCGCTGCTGG TCACCGGAGG CGAAGGCGCG CCGCGCTACC GGATGCTCGG CACCATCAAG
GAGTACGCCG CGCAGCGGCT CGCCGAGGCC GGGGAGTCGG AACTGGCGCG CCACGCGCAC
CTGGCCTATG TCACCGAGCT CGCCGAGACC GCCGACCCGC AGCTTCGCCT CGGCGACCAG
CTGAAGTGGA TCGCCGTGCT GGAGGCCGAA CGCGACGACA TCAGCGCCGC GATGCGCGGC
GCGATCGCCG CCGGGGAAGC CCAGGCCGCG ATGCGGCTGG CTGCGGGCGC CGGTTTCTAC
TGGTGGCTGT GCGGACGCCG CACCGAGGGA ACGGAACTGG TCACCGCCGC CAGCGAACTG
CCCGGCGACG TCGACGACGA GACCCGGGCC ATCGTGTACG GACTGGCCGT GTCGTTCGCC
AGCGCCGGAC GGGCGTCCGA CGAGAACCAC GTCGAGGAAC TGATCCACAA GGCGTACCAC
TACGCGCAGC GCAGCGATTC CCGCAATCCG ATGCTGGCCA TCGCCGTCCC GCTGGAACGC
ATGATGCAGG GGCCCGACCA GATCCTGCCC GCCTGGGAAA CGTTGCTGGA CAACGAGGAC
CCGTGGGTGC GCGCGCTGGC CCGGTTGCAT CTGGGCAAGT CGCGGATCCT GCTCGGCCAC
GGTGGGCCGG AAGCCGACGA GAGCCTCGCA CAGGCGCTCA CCGAGTTCCG GGCGCTGGGC
GAACGGTTCG GCATCTCCTT CGCCCTGACC GAACTGGCCG ACCGCGTCGC CATGCGCGGC
GAGTTCGCCG CCGCCTGTGA GTACTACGAG CAGGCGGCCG TGGTCGTCAC CGAGGTCGGC
GCCTTCGAGG ACGTCACCCG GATGCGGTCG CGGCAGGCGC TGCTGTACTG GCTGCTGGGC
GACACCGAGG CCAGCGCCGC CGCGATGGCC GAGGCCGAAC GGCTCGCCGA GCGGGTCACC
TGGCCGGAGG CGCTGACGGA GCTGACCTTC GCGAAGGCCG AACTGGCGCG GTGGCGTGGC
GACACCGACG AGGTGCGCCG ACAGCTCGAC GTCGTGACGT CGCTGCTGAC CGGAATGACG
GAACGGCCGA CCGTCCGGGT ACTGACACAC AGCCTGCTGG CCTACCTCGC CGAGGATCTC
GACGAGGCCC GGGAACACTG CGCCGTCGTC TACCGGTCGA TCGTCGAACT GGGGCACCCC
GCCCTGATCG CGCACGGGCT GCTCATGATC GCGGGCCTGG CGCTGCGGCG CGGACAGTAC
GAGCAGGCCG CGCGGCTGCT GGCGGCGAGC GAGGCCGTGC GCGGTCTGCC GGACCGCTCG
CAGCCGGACA CCGACCGCAT CGAGCGGGAA ACGCGAGACC GCCTCGGCGA CAAGGAGTAC
GCCGAGGCGG TTCGAGAGGG AACTGAGACG AGCTGGACTC AGCTGGTCGA GGTCACGCTC
GCTTCTTGA
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| Protein sequence | MLGPFEVRRE DGSTADVPGA RLRGLLIALA LNPGRVVQKG TLVDWIWGEQ PPSDAANALQ
RLVSRLRKVL PPGSVEGQTD GYRLNLDPEA VDAVRFERLV SRSRDDDNPL RVRRLREALD
LWRGAAMQDV GLPDSASFDA AVTRLERLRL SAVEERFDAE VGLGHGADLV EELTDLVAAN
PGRERLAAAL MRALVMAGRD NEALLVYERT KEALADALGV DPSPELSELH VALLRGELGR
QEENRDTNLR EELTNYIGKD ADVTAVGKLI GEHRLTTLTG PGGSGKTRMA TETARTLLTD
LPDGAWLVEL AAIGADGDVA QAALTALGLR DALLGEPSTL DPTERLVAAL RDRDALLILD
NCEHVIESAA ALAHRLLGEC RRLRILATSR EPLGITGEAL WPVGPLELPD EDADLDAIEA
APAVQLLRDR ARAVRKDFAV DAPTLATMAR ICRTLDGMPL AIELAAARLR IMTIEQLATR
LDDRFRVLTG GSRTALPRHR TLRAMVDWSW ELLSDAERTV LRRLSVFAGG ASLEAAERVC
GGDTVEVDEV LELLAALTEK SLLVTGGEGA PRYRMLGTIK EYAAQRLAEA GESELARHAH
LAYVTELAET ADPQLRLGDQ LKWIAVLEAE RDDISAAMRG AIAAGEAQAA MRLAAGAGFY
WWLCGRRTEG TELVTAASEL PGDVDDETRA IVYGLAVSFA SAGRASDENH VEELIHKAYH
YAQRSDSRNP MLAIAVPLER MMQGPDQILP AWETLLDNED PWVRALARLH LGKSRILLGH
GGPEADESLA QALTEFRALG ERFGISFALT ELADRVAMRG EFAAACEYYE QAAVVVTEVG
AFEDVTRMRS RQALLYWLLG DTEASAAAMA EAERLAERVT WPEALTELTF AKAELARWRG
DTDEVRRQLD VVTSLLTGMT ERPTVRVLTH SLLAYLAEDL DEAREHCAVV YRSIVELGHP
ALIAHGLLMI AGLALRRGQY EQAARLLAAS EAVRGLPDRS QPDTDRIERE TRDRLGDKEY
AEAVREGTET SWTQLVEVTL AS
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