Gene Snas_5638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5638 
Symbol 
ID8886853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5993695 
End bp5994444 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514361 
Protein GI291303083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0431978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAT GGGACAAGAA CGCCTTCCTG ATGGCCTGGC GGGCCGACTC GGACCGCCTG 
CGGGAAGCGG CCGTGGCCGA CGAGCTGGAC CGGGAAGTCC CCAGTTGCCC GGGTTGGAGT
CTGCGGGATC TGGTCGCGCA CGTCGCGCGG GTCTTCCTGA ACTACGAACG TCTGGTCACC
GCGACGGCGG CGCCGCCCGC GGACAGCAAG GGCGACGGTG ACTTCGATCT CGGCGAGGAC
GTGCTGGCCG AGTACGACAC CGCCGTGCGG AAACTGACGA CGACATTGGA CGGAGTGCGG
TTGGACGACC CCGCGTGGGT ACCGGGGCCG CATGCCCGTA TCGCGCGGTT CTGGATCCGC
AGGCTCATGT GTGAGACGGC GGTTCACCGC TGGGACGCCC AGATGGCCTT CGCCGCGGCC
GAACCCATCG GTTCCCGGGC GGCGGCCGAG GGCATCCAGG AGGTCTTCGA CACCTTCATC
CCGTGGGGCC GTCGCCGCGA GGAATCGACC GCGACCGGCG TGGTGCAGCT GTTCGCCCGC
GACATCGACC GGCACTGGTT CGTGCGGCTG CGCGAGGGCC GCGAGACGCT GCTCGACCCC
GACAGCGTCG ACGTCGACAA CACCGCGATA CAGGCCAGCG CGTCCGGAAA CGCCTCTGAC
CTGTATCTGG CGCTGTGGGG CCGGGTCCAG ACCAGCGTGC TCGAACTCGC CGGTGACGAG
ACCCTGTTCA AGGCCCTGCG GGTGCGGTGA
 
Protein sequence
MTRWDKNAFL MAWRADSDRL REAAVADELD REVPSCPGWS LRDLVAHVAR VFLNYERLVT 
ATAAPPADSK GDGDFDLGED VLAEYDTAVR KLTTTLDGVR LDDPAWVPGP HARIARFWIR
RLMCETAVHR WDAQMAFAAA EPIGSRAAAE GIQEVFDTFI PWGRRREEST ATGVVQLFAR
DIDRHWFVRL REGRETLLDP DSVDVDNTAI QASASGNASD LYLALWGRVQ TSVLELAGDE
TLFKALRVR