Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5500 |
Symbol | |
ID | 8886714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5841744 |
End bp | 5842820 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_003514224 |
Protein GI | 291302946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.230023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGTAT TGACTGAAGC CCAACTCACC GACCCGGTCG CCCTGACCCG CGCCCTGGTC GACATCGAAT CGGTCTCCGG CGACGAACGG GAGATCACCG ACGCCATCGA GGCCGCGCTG CGGCACCGGG CGCACCTGAC GGTGGAGCGG ATCGGCAACG TCGTGTGCGC CCGCACCGAG TTCGGCCGCG GCCGTCGGGT GCTGCTGGCC GGGCACACCG ACACGGTGCC GCTGCACGAC AACTTCCCGT CCCGTACCGA GGGCGACATC ATGTACGGCT GCGGGACCTC CGACATGAAG TCGGGCACCG CGATCGCGCT GCATCTGGCG GCGACCCTCA CCGAACCCGC GCACGACCTG AGTTTCATCT TCTACGACTG CGAGGAGATC GAGAGCGACC GCAACGGGCT GGGGCTGCTG GCGAAGTCGC ACGGCCACCT GCTCGAGGCC GACCTGGCGT TCCTGCTGGA GCCCAGCCAC GGCGAGCTGG AGGCCGGGTG CCAGGGGACG ATGCGCGCCG AGGTCCGCAC CCACGGCAAA CGCGCCCACG CGGCACGCGG CTGGCTGGGC GACAACGCCG TCCACAAGGC CGGGGACATC CTGGATCGGT TGCGCGCGTA CGAGGCCCGG ACCGTCGACA TCGACGGCTG CGTGTACCGC GAGGGGCTCA ACGCGGTGCG CATCCAGGGC GGGGTGGCGG GAAACGTCAT CCCCGACGAA TGCGTCGTGG AGGTCGCCTT CCGGTTCGCG CCCGACCGCA GCGAGGACCA GGCCCGGGCG CACGTGGCCG AGATCTTCGC CGGTTTCGAC ATCGACGTCA CCGATTCCGC CCCGGCCGCG CCGCCGGGAC TGTCGGCGCC CGCCGCCCGC GACTTCCTCG ACACCCTGGG TCGGCCCCCG GTGGCGAAAC TGGGCTGGAC CGACGTGGCC CGGTTCTCGG CCCTGGGCAT CCCGGCGGTG AACTACGGCC CCGGCGACCC CAACCTGGCG CACACCAAGG ACGAGCACGT CTCGTGCGAG CGTATCGTCC AATGTGCTGA TACTTTGCGG GATTATCTGA CAGGAGAGTC GACATGA
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Protein sequence | MVVLTEAQLT DPVALTRALV DIESVSGDER EITDAIEAAL RHRAHLTVER IGNVVCARTE FGRGRRVLLA GHTDTVPLHD NFPSRTEGDI MYGCGTSDMK SGTAIALHLA ATLTEPAHDL SFIFYDCEEI ESDRNGLGLL AKSHGHLLEA DLAFLLEPSH GELEAGCQGT MRAEVRTHGK RAHAARGWLG DNAVHKAGDI LDRLRAYEAR TVDIDGCVYR EGLNAVRIQG GVAGNVIPDE CVVEVAFRFA PDRSEDQARA HVAEIFAGFD IDVTDSAPAA PPGLSAPAAR DFLDTLGRPP VAKLGWTDVA RFSALGIPAV NYGPGDPNLA HTKDEHVSCE RIVQCADTLR DYLTGEST
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